PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427399.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GATA

Protein Properties

Length: 507aa MW: 57495.3 Da PI: 5.2658

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	53.9	2.4e-17	409	443	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+C tkTp+WR+gp g++tLCnaCG++y++ +l XP_026427399.1 409 CSHCEITKTPQWREGPLGPSTLCNACGVCYKRGRL 443 *******************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MAPDQLQEEL RRLQDLVTRL SAEVSEKNQD LEFKDKVLEE RTTFLSMMTE ERDHIYQLYN 60 EEKRKTERIV YENEMLMREL VTQRKEIKLQ GKEIEKLEAQ LDFKSNQLLV LSEEVTRNRN 120 INMSSGDNVQ LQLNLNSFRE ELEEIDYESD SEPNLNQTLI GKEHRSNHDL HEVHKVLNEE 180 VKREDHEKLT KPMDEWGEED FEGSGGEECN DFQDMFPPIP PPESFDMSNN SPDLSSDLPV 240 PDDETAGFQW LSTFVEDSLS DGGITLDMGF CKNSKKDDSC RLRTSNPVAV LKNSSSCPGG 300 EPILSSPDTV VPGRVRSKRP RPANFNQRAA LNLVSPTSCI TNAQDSSYLL SESENFAESH 360 LPYTPKVNGK EQKKKKKKRK RLPPSVPSNR SDHGTLQQQQ QPGGAVKKCS HCEITKTPQW 420 REGPLGPSTL CNACGVCYKR GRLLPEYRPA TSPTFVPSLH SNTHKKVLAM RIEGTPGDMN 480 PRNSAPEFLP ASNTHVPESS QVEACKR

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MAPDQLQEEL RRLQDLVTRL SAEVSEKNQD LEFKDKVLEE RTTFLSMMTE ERDHIYQLYN  60
EEKRKTERIV YENEMLMREL VTQRKEIKLQ GKEIEKLEAQ LDFKSNQLLV LSEEVTRNRN  120
INMSSGDNVQ LQLNLNSFRE ELEEIDYESD SEPNLNQTLI GKEHRSNHDL HEVHKVLNEE  180
VKREDHEKLT KPMDEWGEED FEGSGGEECN DFQDMFPPIP PPESFDMSNN SPDLSSDLPV  240
PDDETAGFQW LSTFVEDSLS DGGITLDMGF CKNSKKDDSC RLRTSNPVAV LKNSSSCPGG  300
EPILSSPDTV VPGRVRSKRP RPANFNQRAA LNLVSPTSCI TNAQDSSYLL SESENFAESH  360
LPYTPKVNGK EQKKKKKKRK RLPPSVPSNR SDHGTLQQQQ QPGGAVKKCS HCEITKTPQW  420
REGPLGPSTL CNACGVCYKR GRLLPEYRPA TSPTFVPSLH SNTHKKVLAM RIEGTPGDMN  480
PRNSAPEFLP ASNTHVPESS QVEACKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	318	322	KRPRP
2	372	380	QKKKKKKRK
3	373	379	KKKKKKR
4	373	381	KKKKKKRKR
5	374	380	KKKKKKR
6	375	381	KKKKKKR
7	375	380	KKKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08010.2	9e-33	GATA family protein