PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026427196.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | bHLH | ||||||||
Protein Properties | Length: 522aa MW: 58544.1 Da PI: 6.8375 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.7 | 1.7e-12 | 342 | 388 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ +++Ka+ L Av YI++L+ XP_026427196.1 342 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLADAVSYINQLK 388 799***********************6.....4*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 522 aa Download sequence |
MEEIISSSSA AASIFSSSNQ ETTAIHNNNN NLQQKLQCLL QSTQEWWTYA IFWRKTYGSD 60 SNNSGGLVLA WGDGHLQGTK DNTINRQMNN NSYKQLQQYH QWFVLDSRKK DQSLEGMVTD 120 AEWFYMVSLT RSFGDRDGSI PSRAYSSGNT IWLSGSQDLQ SFGRNCERTK EAEMLGIKTL 180 VCIPTSAGVV ELGSSDVIIQ QDWSLVRQAK SLFGSDDMTA PGLVISKQQQ QQPNNGLISF 240 LDDRSLSLTD HDIGLIASLQ DEISPHATDL HHHHQQQKQL LDFEMSPKQK VISTNGTQSS 300 SVDSEHSDSD GGLFTITPVL DKRRQPKKRG RKPGNGRENP LNHVEAERQR REKLNHRFYA 360 LRAVVPNVSR MDKASLLADA VSYINQLKAK VNEYESSQAQ IDYKKKKVKI ETHENGLTSR 420 GDGDSTSTTT NSFSNDQEDV KLETEVKILG CDAMIRVQSE NLNHPSARLM NALRDLKCQV 480 HHASVSSVKD LTLQDVVVRI PDELKNENTL EAALLSRFRT ST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32640.1 | 4e-47 | bHLH family protein |