PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427195.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 522aa MW: 58544.1 Da PI: 6.8375

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427195.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.7e-12	342	388	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ +++Ka+ L Av YI++L+ XP_026427195.1 342 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLADAVSYINQLK 388 799*********************6.....4***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MEEIISSSSA AASIFSSSNQ ETTAIHNNNN NLQQKLQCLL QSTQEWWTYA IFWRKTYGSD 60 SNNSGGLVLA WGDGHLQGTK DNTINRQMNN NSYKQLQQYH QWFVLDSRKK DQSLEGMVTD 120 AEWFYMVSLT RSFGDRDGSI PSRAYSSGNT IWLSGSQDLQ SFGRNCERTK EAEMLGIKTL 180 VCIPTSAGVV ELGSSDVIIQ QDWSLVRQAK SLFGSDDMTA PGLVISKQQQ QQPNNGLISF 240 LDDRSLSLTD HDIGLIASLQ DEISPHATDL HHHHQQQKQL LDFEMSPKQK VISTNGTQSS 300 SVDSEHSDSD GGLFTITPVL DKRRQPKKRG RKPGNGRENP LNHVEAERQR REKLNHRFYA 360 LRAVVPNVSR MDKASLLADA VSYINQLKAK VNEYESSQAQ IDYKKKKVKI ETHENGLTSR 420 GDGDSTSTTT NSFSNDQEDV KLETEVKILG CDAMIRVQSE NLNHPSARLM NALRDLKCQV 480 HHASVSSVKD LTLQDVVVRI PDELKNENTL EAALLSRFRT ST

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MEEIISSSSA AASIFSSSNQ ETTAIHNNNN NLQQKLQCLL QSTQEWWTYA IFWRKTYGSD  60
SNNSGGLVLA WGDGHLQGTK DNTINRQMNN NSYKQLQQYH QWFVLDSRKK DQSLEGMVTD  120
AEWFYMVSLT RSFGDRDGSI PSRAYSSGNT IWLSGSQDLQ SFGRNCERTK EAEMLGIKTL  180
VCIPTSAGVV ELGSSDVIIQ QDWSLVRQAK SLFGSDDMTA PGLVISKQQQ QQPNNGLISF  240
LDDRSLSLTD HDIGLIASLQ DEISPHATDL HHHHQQQKQL LDFEMSPKQK VISTNGTQSS  300
SVDSEHSDSD GGLFTITPVL DKRRQPKKRG RKPGNGRENP LNHVEAERQR REKLNHRFYA  360
LRAVVPNVSR MDKASLLADA VSYINQLKAK VNEYESSQAQ IDYKKKKVKI ETHENGLTSR  420
GDGDSTSTTT NSFSNDQEDV KLETEVKILG CDAMIRVQSE NLNHPSARLM NALRDLKCQV  480
HHASVSSVKD LTLQDVVVRI PDELKNENTL EAALLSRFRT ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	4e-47	bHLH family protein