PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026425828.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 534aa MW: 59019.6 Da PI: 6.5363

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026425828.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.3	6.9e-17	199	248	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_026425828.1 199 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 248 78*****************......55**********************997 PP
2	AP2	41	4.8e-13	291	341	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g XP_026425828.1 291 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 341 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MLDLNIGMSV DYTCGEDEVM MERDQHHHHR QQDSSGGGGA GGGGIFIDDS GTSNSSAANV 60 DGGGVSSSNG GDEESCSTFT AYNFEILSRD YKNKITIEDD DDDQEEEQQP SHHNSVYITR 120 QLFPASPNND GGDGISFRLG SSMASSSSAS NSRPHYVDLS FCQNETVHHE VVKPIQQPQP 180 QPQPQPVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD 240 RAAIKFRGVE ADINFNLSDY DDDLKQMKNL TKEEFVHILR RQSTGFSRGS SKYRGVTLHK 300 CGRWEARMGQ FLGKKYIYLG LFDSEVEAAR AYDKAAIKCN GREAVTNFEL SSYEGEMIPD 360 VNLGGNEHNL DLNLGMSPSS FPNAPKGNDH MGAHHIQLTP FELTDARRAA TSTPAEHPHA 420 HAMASEPPPI WNGGYPGFFP NYEEKGTEKR VEVGQQGLSN NWAFQMHGHH GSSANRMLPF 480 STTAAASSGF SSSTTIAPPL PLHHPPHFTN TPPASHPNHY PPSANNSHYF YYRN

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MLDLNIGMSV DYTCGEDEVM MERDQHHHHR QQDSSGGGGA GGGGIFIDDS GTSNSSAANV  60
DGGGVSSSNG GDEESCSTFT AYNFEILSRD YKNKITIEDD DDDQEEEQQP SHHNSVYITR  120
QLFPASPNND GGDGISFRLG SSMASSSSAS NSRPHYVDLS FCQNETVHHE VVKPIQQPQP  180
QPQPQPVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD  240
RAAIKFRGVE ADINFNLSDY DDDLKQMKNL TKEEFVHILR RQSTGFSRGS SKYRGVTLHK  300
CGRWEARMGQ FLGKKYIYLG LFDSEVEAAR AYDKAAIKCN GREAVTNFEL SSYEGEMIPD  360
VNLGGNEHNL DLNLGMSPSS FPNAPKGNDH MGAHHIQLTP FELTDARRAA TSTPAEHPHA  420
HAMASEPPPI WNGGYPGFFP NYEEKGTEKR VEVGQQGLSN NWAFQMHGHH GSSANRMLPF  480
STTAAASSGF SSSTTIAPPL PLHHPPHFTN TPPASHPNHY PPSANNSHYF YYRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-102	AP2 family protein