PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026425536.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 881aa MW: 98924.5 Da PI: 6.9413

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026425536.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.1	1.2e-17	63	136	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY++YA+++GFs+r+ ++++ k +g+ r+f Cskeg ++++ ++ C+a++k++k+++gkw+ tk+++eHnH+ XP_026425536.1 63 FYEAYARRMGFSTRTGQNSRPKSDGTAAYREFACSKEGLKRKSAES--------------CNAMFKIEKKDSGKWVATKFVKEHNHST 136 9************************************9998777..............************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 881 aa Download sequence
MNVEETNVES DNNRTEMGET NNAGEDGVNE SPADKELTSP DEEEAAEPQV GMEFDTEDAA 60 KTFYEAYARR MGFSTRTGQN SRPKSDGTAA YREFACSKEG LKRKSAESCN AMFKIEKKDS 120 GKWVATKFVK EHNHSTVSPS KVHHLRPRRH FAAAKAPAET YSGAGVAASG AMYASMEGNR 180 VPVEANFPAR NISSVDASRA ARFTAPASYM KPCNRKKTLG KDSQNLLDYF KKMQAENPGF 240 FYAIQLDDDC RLSNVFWADA RSRIAYSHFG DSVTFDTMFR PNQYRVPFAP FTGINHHGQM 300 VLFGCALILD ESESSFLWVF KTWLEAMSNR APVSLITDQD RAIQAAVAQV FPGTRHCICK 360 WHILREGQER LAHVCVLHPN FQGELYNCIN MTETIEEFES SWSSLLDKYE LRQNDWLQAL 420 YNARQHWAPV YFRDTFFAAI SSNSGVEVIT SFFDGYVNQQ TTLPLFFRQY ERVLENWYEK 480 EIEADFDTIC TTPVLKTPSP MEKQAAHLYT KKIFTKFQEE LVETFVYTAN KIDGDGTIST 540 YRVAKFEDDH KAYTVTMNAP EMKANCSCQM FEFSGILCRH ILTVFTVTNV LTLPSHYILK 600 RWTRNAKSSI GSDERGNELQ GQESLTMRYN SLCREAIKYA EEGAIASETY NVAMGGLRDG 660 GKKISVVKKT VARTPPPSSV ISGGNVEDSN KKKATSVSDV SPSLWPRQDE VARRFNLNDT 720 GASTPTTSVA DLNLPRMGPV SLHRDEGPDN MVVLPCLKSM TWVMENKTSS PAHRVAVINL 780 KLHDYGKSPS GESEVKFQLS RVTLEPMLKS MAYIGEQLSA PANRVAVINL KLQDTETISG 840 ESEVKFQVSR DTLGAMLRSM AYIREQLSTN AEPPLAKKQR K

Sequence ? help Back to Top

Protein Sequence Length: 881 aa Download sequence

MNVEETNVES DNNRTEMGET NNAGEDGVNE SPADKELTSP DEEEAAEPQV GMEFDTEDAA  60
KTFYEAYARR MGFSTRTGQN SRPKSDGTAA YREFACSKEG LKRKSAESCN AMFKIEKKDS  120
GKWVATKFVK EHNHSTVSPS KVHHLRPRRH FAAAKAPAET YSGAGVAASG AMYASMEGNR  180
VPVEANFPAR NISSVDASRA ARFTAPASYM KPCNRKKTLG KDSQNLLDYF KKMQAENPGF  240
FYAIQLDDDC RLSNVFWADA RSRIAYSHFG DSVTFDTMFR PNQYRVPFAP FTGINHHGQM  300
VLFGCALILD ESESSFLWVF KTWLEAMSNR APVSLITDQD RAIQAAVAQV FPGTRHCICK  360
WHILREGQER LAHVCVLHPN FQGELYNCIN MTETIEEFES SWSSLLDKYE LRQNDWLQAL  420
YNARQHWAPV YFRDTFFAAI SSNSGVEVIT SFFDGYVNQQ TTLPLFFRQY ERVLENWYEK  480
EIEADFDTIC TTPVLKTPSP MEKQAAHLYT KKIFTKFQEE LVETFVYTAN KIDGDGTIST  540
YRVAKFEDDH KAYTVTMNAP EMKANCSCQM FEFSGILCRH ILTVFTVTNV LTLPSHYILK  600
RWTRNAKSSI GSDERGNELQ GQESLTMRYN SLCREAIKYA EEGAIASETY NVAMGGLRDG  660
GKKISVVKKT VARTPPPSSV ISGGNVEDSN KKKATSVSDV SPSLWPRQDE VARRFNLNDT  720
GASTPTTSVA DLNLPRMGPV SLHRDEGPDN MVVLPCLKSM TWVMENKTSS PAHRVAVINL  780
KLHDYGKSPS GESEVKFQLS RVTLEPMLKS MAYIGEQLSA PANRVAVINL KLQDTETISG  840
ESEVKFQVSR DTLGAMLRSM AYIREQLSTN AEPPLAKKQR K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein