PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026425161.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 347aa    MW: 38121.6 Da    PI: 4.9729
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026425161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.22e-17256289134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_026425161.1 256 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 289
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MIGPGFIDEM DLDLCGDFFD HIDDLLDFPC EEIEGNGGVI GGGDCNAFQD MWPSIPPPES  60
LVDPCSGFSN SSSDLSTELP VPHEDIVQLE WLSNFVEDSF SAGSIPLDTD FINNNKKDES  120
HRFRTSSPVS VLESNSSCSG GKTMSLSPDT VVPGRARSKR PRPATFNPRP ALNFVSPVSS  180
ITNVQNLSVS NSYLSSESEN YAESHPPYIP NYDGTEQKKK KKKKKLTPSL PSYSSDLDDS  240
LQQQQQQQPG VAVRKCLHCE ITKTPQWRAG PMGPKTLCNA CGVRYKSGRL FPEYRPAASP  300
TFVASLHSNS HKKVLEMRVK GTPDDMNPMS PAPEFLPASN THMLDYI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159163KRPRP
2218224KKKKKKK
3219225KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.24e-38GATA family protein