PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026425159.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 355aa    MW: 39082.8 Da    PI: 5.091
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026425159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.12.1e-17264297134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_026425159.1 264 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 297
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MNFVQVNKMI GPGFIDEMDL DLCGDFFDHI DDLLDFPCEE IEGNGGVIGG GDCNAFQDMW  60
PSIPPPESLV DPCSGFSNSS SDLSTELPVP HEDIVQLEWL SNFVEDSFSA GSIPLDTDFI  120
NNNKKDESHR FRTSSPVSVL ESNSSCSGGK TMSLSPDTVV PGRARSKRPR PATFNPRPAL  180
NFVSPVSSIT NVQNLSVSNS YLSSESENYA ESHPPYIPNY DGTEQKKKKK KKKLTPSLPS  240
YSSDLDDSLQ QQQQQQPGVA VRKCLHCEIT KTPQWRAGPM GPKTLCNACG VRYKSGRLFP  300
EYRPAASPTF VASLHSNSHK KVLEMRVKGT PDDMNPMSPA PEFLPASNTH MLDYI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167171KRPRP
2226232KKKKKKK
3227233KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.24e-38GATA family protein