PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026424875.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GATA

Protein Properties

Length: 703aa MW: 78971.5 Da PI: 6.7137

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026424875.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	45.5	1e-14	632	663	1	32
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32 C +C +tkT+ WR gp g+ tLCnaCG++y++ XP_026424875.1 632 CMHCEVTKTAVWRGGPMGPGTLCNACGVRYKS 663 99*****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MATDLQEELS RLQDVALRLT AELGGKNEKL KHMGKMLEEN STSLSRITEK RDHLNQAYNE 60 EKRKMKRTMD ENERLMREFE AQRKEIEQQA KEIEKRDAQL DFKNKQLQVL RMLKNGTQDS 120 QKITTVQEKH GGVEIMSGRD KVQVQIDTNG LHSELEVKDY ELDSELSGKK TLVSKEHKCN 180 HDPQEERKVS IEASRKITTV QEKPKHQGVE TVSSRDKVQV RIDTNGLHHE VAVKDYELHS 240 GLSRKKTLVS KKHRSLYDLQ KARKASIKTS RKKTTGQGKH EGLENMSSWR DKLQVQIDTN 300 GQHNGMEEKA YELDNELTRK QILVGKEHRS NHELQEAHKV SIEEDTREDD EKSIGLIEEW 360 GKGDIEGSRG DMFPSIPPSE YLVDPCNDMP NNSSDLSSVL PGLNVTKEDD EELVEERGKG 420 DTEGSGGVEI NAVQDMFPLI PPPESSADPC NDMLNNSSYL SSALPVPDDE IAELEWLSTF 480 VDDSLSAGGI TVDKDYSNNN EKNDSATVLK NSSSCSGGKT MPLSPDTVVP TPARSKRPRS 540 AVFYEQPAPK LASHESCLID VEIQLMPNSS YISSASECLV KSHPSYTPNV NGKEQKKKKK 600 MKRPPPCMPN HSSDRNNSLQ QQEQLGLAYQ KCMHCEVTKT AVWRGGPMGP GTLCNACGVR 660 YKSGLLFPEY RPKASPTYVA SMRRNSHNKV LETRVNGTPA TAR

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MATDLQEELS RLQDVALRLT AELGGKNEKL KHMGKMLEEN STSLSRITEK RDHLNQAYNE  60
EKRKMKRTMD ENERLMREFE AQRKEIEQQA KEIEKRDAQL DFKNKQLQVL RMLKNGTQDS  120
QKITTVQEKH GGVEIMSGRD KVQVQIDTNG LHSELEVKDY ELDSELSGKK TLVSKEHKCN  180
HDPQEERKVS IEASRKITTV QEKPKHQGVE TVSSRDKVQV RIDTNGLHHE VAVKDYELHS  240
GLSRKKTLVS KKHRSLYDLQ KARKASIKTS RKKTTGQGKH EGLENMSSWR DKLQVQIDTN  300
GQHNGMEEKA YELDNELTRK QILVGKEHRS NHELQEAHKV SIEEDTREDD EKSIGLIEEW  360
GKGDIEGSRG DMFPSIPPSE YLVDPCNDMP NNSSDLSSVL PGLNVTKEDD EELVEERGKG  420
DTEGSGGVEI NAVQDMFPLI PPPESSADPC NDMLNNSSYL SSALPVPDDE IAELEWLSTF  480
VDDSLSAGGI TVDKDYSNNN EKNDSATVLK NSSSCSGGKT MPLSPDTVVP TPARSKRPRS  540
AVFYEQPAPK LASHESCLID VEIQLMPNSS YISSASECLV KSHPSYTPNV NGKEQKKKKK  600
MKRPPPCMPN HSSDRNNSLQ QQEQLGLAYQ KCMHCEVTKT AVWRGGPMGP GTLCNACGVR  660
YKSGLLFPEY RPKASPTYVA SMRRNSHNKV LETRVNGTPA TAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25830.1	2e-30	GATA family protein