PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026423907.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 369aa    MW: 41180 Da    PI: 4.9223
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026423907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.37.8e-17296330135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C +  Tp+WR gp g+ktLCnaCG+++++ +l
  XP_026423907.1 296 CTHCLSQRTPQWRAGPLGPKTLCNACGVRFKSGRL 330
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MDFYRNMSVV TGGGGGENGG FPSSDFQPEQ FVVSPSSTTY SSKLGVVSSS SCCSVDDLFS  60
TQNMEAGDVN IEWLSNLVED CLSNTGNCIN QPLPTNDHQP LNVKKHYSSV SLADNQHHST  120
APTAPSLQNF LSIPTGNSTT KRRRTAKLPR KPFSSNSSIR SSTSGKINSR NSSWSSHHQG  180
AKDPQNQNPN HHHVVMTSEY MTPLLVHQAY WLADSELINV PQNESTNNNS TSTTTFTTTT  240
TTIDEDDEQE EIMMKMEEEE EEEEEEEEEE EEEEEEEEEE GRRKDSLGNL GQPRRCTHCL  300
SQRTPQWRAG PLGPKTLCNA CGVRFKSGRL LPEYRPAKSP TFVSYKHSNS HKKVLEMRMS  360
ILPSSIHSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.18e-35GATA family protein