PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026423906.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 371aa    MW: 41437.3 Da    PI: 4.8626
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026423906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.37.8e-17298332135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C +  Tp+WR gp g+ktLCnaCG+++++ +l
  XP_026423906.1 298 CTHCLSQRTPQWRAGPLGPKTLCNACGVRFKSGRL 332
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MDFYRNMSVV TGGGGGENGG FPSSDFQPEQ FVVSPSSTTY SSKLGVVSSS SCCSVDDLFS  60
TQNMEQEAGD VNIEWLSNLV EDCLSNTGNC INQPLPTNDH QPLNVKKHYS SVSLADNQHH  120
STAPTAPSLQ NFLSIPTGNS TTKRRRTAKL PRKPFSSNSS IRSSTSGKIN SRNSSWSSHH  180
QGAKDPQNQN PNHHHVVMTS EYMTPLLVHQ AYWLADSELI NVPQNESTNN NSTSTTTFTT  240
TTTTIDEDDE QEEIMMKMEE EEEEEEEEEE EEEEEEEEEE EEGRRKDSLG NLGQPRRCTH  300
CLSQRTPQWR AGPLGPKTLC NACGVRFKSG RLLPEYRPAK SPTFVSYKHS NSHKKVLEMR  360
MSILPSSIHS E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.19e-35GATA family protein