PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026422939.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 366aa    MW: 39869 Da    PI: 7.5202
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026422939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.6e-10215259554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P++      K + a++L + v+Y+k L
  XP_026422939.1 215 HSIAERLRRERIAERMKALQELVPSS-----NKTDRAAMLDEIVDYVKFL 259
                     99***********************7.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MANSNHHHNH HQNHQQNHPE GLTDDFFEQI LAIPSYPGNH HHQHQRHDSS GLTTNVGNLA  60
GTPPPPSSSM LLQLNSGNSN IYHQQQQQQG NLFPLGLGLE QSLGKTSSTS FMKLNEESST  120
TSGMGHASSS SNDNRGGGLG NSAHMSNLFP SAFGGHHVQQ QQQQRHSVRP TLQSHQVHQQ  180
PFHGQPTPGA AGTVQHPPAI RPRVRARRGQ ATDPHSIAER LRRERIAERM KALQELVPSS  240
NKTDRAAMLD EIVDYVKFLR LQVKVLSMSR LGGAGAVAQL VADTPLSSVE GEASDGGSNR  300
QAWEKWSTDG TEHQVAKLIE EDVGAAMQFL QSKALCIMPI SLASAIYHTQ TDNSSAIKPE  360
PNAQNQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220225RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.23e-59bHLH family protein