PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026420852.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 26089.9 Da PI: 9.3946 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.6 | 3e-05 | 37 | 85 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + + erE+ Rd +N+ f eL +l + + + Ka+iL A++ +++L XP_026420852.1 37 KIHKAEREKLKRDYMNELFLELGNVLEPT----RQNNGKASILDDATRLLRDL 85 567889********************996....57899999******999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MVSEVSGPMA TQVNLGPQKS GGRSFRNKKN TLKVSKKIHK AEREKLKRDY MNELFLELGN 60 VLEPTRQNNG KASILDDATR LLRDLLTQVK SLKKENVALL SESHYVTAEK NELKDENATL 120 ESHIESLQSE LRERTLLKPG WDAAVPAQLP INNILPAFSK DHLPIPVVET ALQSQPILGP 180 VLVIPLCHDV QASSETEAIQ TPNKMLSNVS RPHARYPTPA DSWPSQLLGE KQKAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 5e-38 | bHLH family protein |