PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026419516.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 214aa MW: 23559.3 Da PI: 8.3838 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.8 | 0.00037 | 29 | 51 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk Fs+ L H +H XP_026419516.1 29 FECKTCGKGFSSFQALGGHRASH 51 89**********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MNSTEQPSTA SRLNTESTEQ QQSTASRVFE CKTCGKGFSS FQALGGHRAS HKKLRLVKGD 60 GYSNMDGRLS SSSKSSSALH ECSICGKGYA IGQALGGHMR RHRNNTSKES PSRSLSLSPP 120 SSLPPEEEQL FSLPLLPHSS SPLAEEPRLS LPLLPQTPEP KTLKRKYYAV HNDKRLCLDL 180 NLGPPCSYEE ELDSEDHHHH QSTTKPYLGL TLFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46090.1 | 1e-22 | C2H2 family protein |