PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026418373.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 349aa MW: 40836.5 Da PI: 9.2894 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.9 | 3.1e-15 | 4 | 53 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rWT eEd +l +vkq+G++ W++++++m+ +R +k+c +rw +yl XP_026418373.1 4 RQRWTSEEDAILRAYVKQYGPREWNLVSERMNvsIHRDAKSCLERWKNYL 53 89********************************99************97 PP | |||||||
2 | Myb_DNA-binding | 33.6 | 8.9e-11 | 59 | 103 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T++E+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + XP_026418373.1 59 KGSLTEDEQCLVIHLQAKHGNK-WKKIAAEVP-GRTAKRLAKWWEVF 103 57789*****************.*********.*********99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MKDRQRWTSE EDAILRAYVK QYGPREWNLV SERMNVSIHR DAKSCLERWK NYLKPGIKKG 60 SLTEDEQCLV IHLQAKHGNK WKKIAAEVPG RTAKRLAKWW EVFKEKQQRE QKESTSSLEP 120 IEEGKYDRIL ETFAQKLVNQ RQTPQFVMTT APNGAFLHSG PPTPPTPTLL PPWLSTSNGL 180 PTNTRPLSPS VTLTLSPSTV DPAPTIPWLH PERGLNCTLP PSHGRDNQIV NELVEYCREL 240 EEGHRVWAEH KKEAEWRVRR MELQLESEKV NKRREKMEDI ESKIRALREE EKVILERIDY 300 EYKEQLTGLK RDAESKEQKL AEQWFAKHMR LTKFLEQRSC VSSPNDPNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37630.1 | 1e-135 | MYB family protein |