PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418075.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GATA

Protein Properties

Length: 512aa MW: 57869.9 Da PI: 5.7125

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418075.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	53.9	2.5e-17	406	440	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+C tkTp+WR+gp g++tLCnaCG++y++ +l XP_026418075.1 406 CSHCEITKTPQWREGPLGPSTLCNACGVCYKRGRL 440 *******************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MAPDQLQEEL RRLQDLVTRL SAEVGEKNQE LEFKDKVLEE RTTFLSMMTE ERDHIYQLYN 60 EEKRKTVRIV YENEMLMREL VTQRKEIKLQ GKEIEKLEAQ LDFKSSQLLV LSEEVTRKRN 120 INMSSGDNVQ LQLNLNSFRE ELEEKDYESD SEPNLNQNLI GKEHISNHDL HEVHKVLNEE 180 VKREDHEKLT KPMDEWGEED FEGSGGEECN DFQDMFPPIP PPESFDMSNN SPDLSSDLPV 240 PDDETAGFQW LSTFVEDSLS DGGITLDMGF CKNSKKDDSC RLRTSNPVAV LKNSSSCPGG 300 EPMLPSPSTV VPGRVRSKRP RPANFNQRAA LNLVSPTSCI TNAQDNSYLL SESENFAESH 360 LPCTPKVNGK EQKKKKKKRK RLPPSVPSNR SDHAQQQQPG GGTKKCSHCE ITKTPQWREG 420 PLGPSTLCNA CGVCYKRGRL LPEYRPATSP TFVPSLHSNT HKKVLAMRIE GTPADMNPTN 480 PGPEFLPARN THLLESSQVG ARKTETKVPS SI

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MAPDQLQEEL RRLQDLVTRL SAEVGEKNQE LEFKDKVLEE RTTFLSMMTE ERDHIYQLYN  60
EEKRKTVRIV YENEMLMREL VTQRKEIKLQ GKEIEKLEAQ LDFKSSQLLV LSEEVTRKRN  120
INMSSGDNVQ LQLNLNSFRE ELEEKDYESD SEPNLNQNLI GKEHISNHDL HEVHKVLNEE  180
VKREDHEKLT KPMDEWGEED FEGSGGEECN DFQDMFPPIP PPESFDMSNN SPDLSSDLPV  240
PDDETAGFQW LSTFVEDSLS DGGITLDMGF CKNSKKDDSC RLRTSNPVAV LKNSSSCPGG  300
EPMLPSPSTV VPGRVRSKRP RPANFNQRAA LNLVSPTSCI TNAQDNSYLL SESENFAESH  360
LPCTPKVNGK EQKKKKKKRK RLPPSVPSNR SDHAQQQQPG GGTKKCSHCE ITKTPQWREG  420
PLGPSTLCNA CGVCYKRGRL LPEYRPATSP TFVPSLHSNT HKKVLAMRIE GTPADMNPTN  480
PGPEFLPARN THLLESSQVG ARKTETKVPS SI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	318	322	KRPRP
2	372	380	QKKKKKKRK
3	373	379	KKKKKKR
4	373	381	KKKKKKRKR
5	374	380	KKKKKKR
6	375	381	KKKKKKR
7	375	380	KKKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54810.2	6e-32	GATA family protein