PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026417840.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 511aa MW: 57046 Da PI: 4.9705

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026417840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112	4.1e-35	96	187	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++l+++isw ng+sfvvld+ ef+k vLp+ Fkh+nf+SFvRQLn+YgF+kv++++ weF+++ F +g+++ll++ XP_026417840.1 96 FLSKTYDLVDDPSLDKVISWGLNGQSFVVLDTMEFSKVVLPRNFKHNNFSSFVRQLNTYGFRKVETDR---------WEFANEDFLRGRRHLLKN 181 9***************************************************************99.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+ks XP_026417840.1 182 IHRRKS 187 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MNKSPTSEFG TFSSPPSMFL GQKGSTHGEC SGFTDSSSST PLMVEPLTAI KQFSLEENSN 60 REKFSESNLK IKGENTRVGS IPQPLECLQG NPVPPFLSKT YDLVDDPSLD KVISWGLNGQ 120 SFVVLDTMEF SKVVLPRNFK HNNFSSFVRQ LNTYGFRKVE TDRWEFANED FLRGRRHLLK 180 NIHRRKSLQG QQIGGFSQFT GETGISKLDG EVQQLRNDRN FLIQELSNLH REHRGRAEQV 240 EAMKQRMTVA EQRQKQMLSF LAKVLQNPVF LSRLQLMKKQ REITSPRMKR KFIKQQSADG 300 CKLASSVEGK IVNYDSKLCH VASSALSDIE EPVTDKHLTD NFLDDMVGKL ELGATHKQVQ 360 VWNVASNELV QELVGASGQM GMEILDVGSL GCQGGKEVLN GQPEVVGEPF VSFAEDLAKE 420 KTFPDFMSPG VESIIKEEDI WSKGSEISFG LPTSTSDIWG DIANFDPQDL QVIGGFSNLW 480 DQEFEAAGGS GSNMWADDEL SFNDTESSPD N

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MNKSPTSEFG TFSSPPSMFL GQKGSTHGEC SGFTDSSSST PLMVEPLTAI KQFSLEENSN  60
REKFSESNLK IKGENTRVGS IPQPLECLQG NPVPPFLSKT YDLVDDPSLD KVISWGLNGQ  120
SFVVLDTMEF SKVVLPRNFK HNNFSSFVRQ LNTYGFRKVE TDRWEFANED FLRGRRHLLK  180
NIHRRKSLQG QQIGGFSQFT GETGISKLDG EVQQLRNDRN FLIQELSNLH REHRGRAEQV  240
EAMKQRMTVA EQRQKQMLSF LAKVLQNPVF LSRLQLMKKQ REITSPRMKR KFIKQQSADG  300
CKLASSVEGK IVNYDSKLCH VASSALSDIE EPVTDKHLTD NFLDDMVGKL ELGATHKQVQ  360
VWNVASNELV QELVGASGQM GMEILDVGSL GCQGGKEVLN GQPEVVGEPF VSFAEDLAKE  420
KTFPDFMSPG VESIIKEEDI WSKGSEISFG LPTSTSDIWG DIANFDPQDL QVIGGFSNLW  480
DQEFEAAGGS GSNMWADDEL SFNDTESSPD N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	9e-87	HSF family protein