PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026416220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 204aa MW: 22538.7 Da PI: 7.1488 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.1 | 4.2e-05 | 23 | 53 | 7 | 32 |
HHHHHHHHHHHHHHHHHHCTSCCC....... CS HLH 7 erErrRRdriNsafeeLrellPkas.....k 32 +E++RR++++ ++L +l+P+ + + XP_026416220.1 23 TIEKNRRSHMKALCFKLVSLIPPTTsthdnN 53 69*********************64355552 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 204 aa Download sequence |
MKNSSKCASS SSTCAAAAID RETIEKNRRS HMKALCFKLV SLIPPTTSTH DNNHSSKKII 60 HIQELTKRID KLKRKKDLLT ATTLPNTDHC GDQDIITTNA AAVVAATSTC SLNTSTEICG 120 NDLLDLPILQ VRNFDSTTLE VVLITGMNKQ FLYYQLITVL EEEGAEIVNA SFATVDDKIF 180 YTVHSQVTSY HADNIFRLVV AVVY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G10586.1 | 7e-09 | bHLH family protein |