PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026415940.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family WOX
Protein Properties Length: 239aa    MW: 27385.4 Da    PI: 9.4027
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026415940.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.84.5e-19564357
                    --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    +R+++t+eq++ Le +++   ++p a+e+++L++kl    +++ ++V++WFqN++a++k+
  XP_026415940.1  5 SRWNPTQEQIDMLEGFYKAgIKTPRAQEIQHLTSKLrvygDIEAKNVFYWFQNHKARQKQ 64
                    7*****************99**************************************97 PP

2Wus_type_Homeobox101.46.4e-33466365
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++RW+Pt+eQi +Le  yk+G++tP ++eiq++t++L+ yG ie kNVfyWFQN+kaR++q+q
     XP_026415940.1  4 NSRWNPTQEQIDMLEGFYKAGIKTPRAQEIQHLTSKLRVYGDIEAKNVFYWFQNHKARQKQRQ 66
                       79***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MCSNSRWNPT QEQIDMLEGF YKAGIKTPRA QEIQHLTSKL RVYGDIEAKN VFYWFQNHKA  60
RQKQRQVRHS YGHDPRIHKK FLYNPMSSRK DSDPCPFPYT NSNGPSTWPP PSYAHRRQNL  120
KLPLPPRSAI IGRSSTNIAN PNIQPADNHA HGIEYVNYKE KQALACTSSS ISSVETLPLF  180
PIHPTGILKS NNEEKYDSSS STKFSLCSAS SSTYHQEEYD PNEAQSRSSQ QFFDFFATH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.11e-28WOX family protein