PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026415940.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | WOX | ||||||||
Protein Properties | Length: 239aa MW: 27385.4 Da PI: 9.4027 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.8 | 4.5e-19 | 5 | 64 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq++ Le +++ ++p a+e+++L++kl +++ ++V++WFqN++a++k+ XP_026415940.1 5 SRWNPTQEQIDMLEGFYKAgIKTPRAQEIQHLTSKLrvygDIEAKNVFYWFQNHKARQKQ 64 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 101.4 | 6.4e-33 | 4 | 66 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+Pt+eQi +Le yk+G++tP ++eiq++t++L+ yG ie kNVfyWFQN+kaR++q+q XP_026415940.1 4 NSRWNPTQEQIDMLEGFYKAGIKTPRAQEIQHLTSKLRVYGDIEAKNVFYWFQNHKARQKQRQ 66 79***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MCSNSRWNPT QEQIDMLEGF YKAGIKTPRA QEIQHLTSKL RVYGDIEAKN VFYWFQNHKA 60 RQKQRQVRHS YGHDPRIHKK FLYNPMSSRK DSDPCPFPYT NSNGPSTWPP PSYAHRRQNL 120 KLPLPPRSAI IGRSSTNIAN PNIQPADNHA HGIEYVNYKE KQALACTSSS ISSVETLPLF 180 PIHPTGILKS NNEEKYDSSS STKFSLCSAS SSTYHQEEYD PNEAQSRSSQ QFFDFFATH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 1e-28 | WOX family protein |