PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026415316.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | GATA | ||||||||
Protein Properties | Length: 361aa MW: 39512.5 Da PI: 6.2613 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 53.9 | 2.5e-17 | 274 | 307 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +C tkTp+WR gp g+ktLCnaCG++y++ + XP_026415316.1 274 CLHCEITKTPQWRAGPLGPKTLCNACGVRYKSGR 307 99*****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence |
MLGPAFIDEI GSSNNCGDLF DSIEDLLDFP IEEVEGDLVG GSVGAGNQFD SGVWPGSAPP 60 VEPLTSVFND NNTTSDLDTG LPYDDFPQME WLSSFMEDSF SGGSTILDSD TTTNVADNKN 120 NVSSNIKTES HEFNQFQTSS PVSVLESSSS CSSGMKTMPL NAESFIRGRA RSKRPRPATF 180 NPRPVIQLIS PTSSITDATT TTATSSSEIL SEIGNHAESR VMMKLAERGY MSSFEPKKKI 240 KKIKIKKIKM PTLSGSMDYF QNVATASNAP VRKCLHCEIT KTPQWRAGPL GPKTLCNACG 300 VRYKSGRLYP EYRPAASPTF VPTQHSNSHK KVLEMRIRTC EKMQKPTVEF LPKASHLLDE 360 I |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 173 | 177 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54810.2 | 1e-39 | GATA family protein |