PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026414513.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 544aa MW: 60245 Da PI: 6.5677

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026414513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.3	7.1e-17	207	256	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_026414513.1 207 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 256 78*****************......55**********************997 PP
2	AP2	41	4.9e-13	299	349	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g XP_026414513.1 299 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 349 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MLDLNIGMSV DYTCGEDEVM MERDQHHHHQ QRQQESSGGG GAGGGGIFID DSGTSNSSAA 60 NVDGGGVSSS NGGDEESCST FTAYNFEILS RDYKNKITIE DDDDDQEEEQ QLSHHNSIYV 120 TRQLFPASPN STNDGGDGIS IRLGSSMASS SSASNSRPHY VDLSFCQNET VHREVVKPIQ 180 QPQPQPQPQP QPQPVKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA 240 HAAARAYDRA AIKFRGVEAD INFNLSDYDD DLKQMKNLTK EEFVHILRRQ STGFSRGSSK 300 YRGVTLHKCG RWEARMGQFL GKKYIYLGLF DSEVEAARAY DKAAIKCNGR EAVTNFELSS 360 YEGEMIPDVN LGGNEHNLDL NLGMSPSSFP NTPKGNDHMG AHHIQLTPFE LTDARRGSAA 420 TSTPAEHPHA HVMASEPPPI WNGGYPGFFP NYEERGTEKR VEVGQQGLSN NWAFQMHGHH 480 GSSANRMLPF STTAAASSGF SSSTTIAPPL PLHHPPHFTN TPQTSHPHHY PPSANNPQYF 540 YYRN

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MLDLNIGMSV DYTCGEDEVM MERDQHHHHQ QRQQESSGGG GAGGGGIFID DSGTSNSSAA  60
NVDGGGVSSS NGGDEESCST FTAYNFEILS RDYKNKITIE DDDDDQEEEQ QLSHHNSIYV  120
TRQLFPASPN STNDGGDGIS IRLGSSMASS SSASNSRPHY VDLSFCQNET VHREVVKPIQ  180
QPQPQPQPQP QPQPVKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA  240
HAAARAYDRA AIKFRGVEAD INFNLSDYDD DLKQMKNLTK EEFVHILRRQ STGFSRGSSK  300
YRGVTLHKCG RWEARMGQFL GKKYIYLGLF DSEVEAARAY DKAAIKCNGR EAVTNFELSS  360
YEGEMIPDVN LGGNEHNLDL NLGMSPSSFP NTPKGNDHMG AHHIQLTPFE LTDARRGSAA  420
TSTPAEHPHA HVMASEPPPI WNGGYPGFFP NYEERGTEKR VEVGQQGLSN NWAFQMHGHH  480
GSSANRMLPF STTAAASSGF SSSTTIAPPL PLHHPPHFTN TPQTSHPHHY PPSANNPQYF  540
YYRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-102	AP2 family protein