PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026414368.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 484aa MW: 54360.8 Da PI: 7.6231

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026414368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.8	2.6e-29	170	229	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEE...S--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYe...geHnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d+k+++++Y+ ++Hnh+ XP_026414368.1 170 EDGYNWRKYGQKQVKGSENPRSYYKCTYQNCPMKKKVERSL-DGKITDVVYKpskDSHNHP 229 7**************************************.*******6444789998 PP
2	WRKY	102.8	1.9e-32	340	398	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vkg+++prsYY+Cts gC+v+k+ver+a++ + v++tYeg+Hnh+ XP_026414368.1 340 LDDGFRWRKYGQKVVKGNPNPRSYYKCTSLGCQVRKHVERAANNIRSVITTYEGKHNHD 398 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MASSPSSLSP HLSFPNQFMM NSSFSDLLTK DDESIKQGLL FNEQIEFGFK SKFKSNSPAS 60 LPIGGSCPSP SFYNFPSGFL DSPVLLSSNN YLLPSPTTGA FPAHEQFNWM GNSNSSNNYQ 120 IKQEEEKKIN DFSFRPSVTD TPLQSGDSES DYKHYPHQPI QTLREQKRSE DGYNWRKYGQ 180 KQVKGSENPR SYYKCTYQNC PMKKKVERSL DGKITDVVYK PSKDSHNHPK PQPSKKSLAA 240 AVAASQLVQQ PSVSSNSYSQ TVSVSTQDNN SSISVDDDEF DNTSLKRSKS GTTGDLDESE 300 PKSKKWKNEG ENEVLSGYGN SRVVKEPKVV VQTTSDIDIL DDGFRWRKYG QKVVKGNPNP 360 RSYYKCTSLG CQVRKHVERA ANNIRSVITT YEGKHNHDIP AARGSYRPSH NNNTSSSNSN 420 NSSITNVAMS TSSNEQVPYT LEMMQNSENY EYGSYMNQQH NVENTFSETK SEPMKDDVLL 480 ELLY

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MASSPSSLSP HLSFPNQFMM NSSFSDLLTK DDESIKQGLL FNEQIEFGFK SKFKSNSPAS  60
LPIGGSCPSP SFYNFPSGFL DSPVLLSSNN YLLPSPTTGA FPAHEQFNWM GNSNSSNNYQ  120
IKQEEEKKIN DFSFRPSVTD TPLQSGDSES DYKHYPHQPI QTLREQKRSE DGYNWRKYGQ  180
KQVKGSENPR SYYKCTYQNC PMKKKVERSL DGKITDVVYK PSKDSHNHPK PQPSKKSLAA  240
AVAASQLVQQ PSVSSNSYSQ TVSVSTQDNN SSISVDDDEF DNTSLKRSKS GTTGDLDESE  300
PKSKKWKNEG ENEVLSGYGN SRVVKEPKVV VQTTSDIDIL DDGFRWRKYG QKVVKGNPNP  360
RSYYKCTSLG CQVRKHVERA ANNIRSVITT YEGKHNHDIP AARGSYRPSH NNNTSSSNSN  420
NSSITNVAMS TSSNEQVPYT LEMMQNSENY EYGSYMNQQH NVENTFSETK SEPMKDDVLL  480
ELLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	2e-92	WRKY family protein