PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026414106.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GeBP
Protein Properties Length: 543aa    MW: 61082.3 Da    PI: 8.208
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026414106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57371.12.1e-22107200298
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                     +++r+w++ Dei+lL+ + d+  k+g +   +  afye ++ +is++v+ +q+ +Ki++ +++++ k+++ k+g   +f+++h q++ elsk iW
  XP_026414106.1 107 NPRRVWTDADEILLLKDMADY-VKRGEN--PNSAAFYESIQTKISVDVNFEQIRNKIKKARQRYEAKEDEEKKGIVLRFTTPHLQECHELSKPIW 198
                     689******************.778866..6789************************************************************* PP

          DUF573  97 gs 98 
                     gs
  XP_026414106.1 199 GS 200
                     95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MDVRKSPRLP KNPSAAASSS STGRVEEREV QEEEESSNHS QQINKLISTY FTPPKLKPNI  60
SIPKRPVSKF KPNSSSTTTN VEKSQVVEAE KPKKKKKNDA GAVNEKNPRR VWTDADEILL  120
LKDMADYVKR GENPNSAAFY ESIQTKISVD VNFEQIRNKI KKARQRYEAK EDEEKKGIVL  180
RFTTPHLQEC HELSKPIWGS GGEPEDGGGG VEGSETVGVE NEDDLEIRKS KRDEKRKAAE  240
SKKPGKENGE RKDGAAEEPE EEDVQIHAVA EKEKEVGAEN VQVHADAEKE KEVEAENVHV  300
NAVAENQKEV EGGQTKEKNK KKNRKTEENV QVHADAEKQK EVAEAGETKE KNKKKKKKKR  360
KAEKNGQVHA DAEKQKEVVE AGEIKEKNKK KKRKAEENVQ VHADAEKQKE VEAENVHVHA  420
DAEKQKEVEG GETKERNKKK KKKRKAGAGD ADCVSENLIE QLAKAALGLE SSLNEETKKA  480
IQSIEPSKVA ALEEKWKEFQ VQEAQMLMQR DVLVHELASM ISEASVRWKP FTEKMPSAQI  540
TRD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1321361KKNRKTEENVQVHADAEKQKEVAEAGETKEKNKKKKKKKRK
2353359KKKKKKK
3353361KKKKKKKRK
4353393KKNRKTEENVQVHADAEKQKEVAEAGETKEKNKKKKKKKRK
5354360KKKKKKK
6354394KKNRKTEENVQVHADAEKQKEVAEAGETKEKNKKKKKKKRK
7355361KKKKKKK
8355395KKNRKTEENVQVHADAEKQKEVAEAGETKEKNKKKKKKKRK
9356361KKKKRK
10356396KKNRKTEENVQVHADAEKQKEVAEAGETKEKNKKKKKKKRK
11357387KKKRKAEKNGQVHADAEKQKEVVEAGEIKEK
12357397KKNRKTEENVQVHADAEKQKEVAEAGETKEKNKKKKKKKRK
13358388KKKRKAEKNGQVHADAEKQKEVVEAGEIKEK
14358398KKNRKTEENVQVHADAEKQKEVAEAGETKEKNKKKKKKKRK
15389394KKKKRK
16435441ERNKKKK
17438444KKKKKKK
18439445KKKKKKK
19440445KKKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.21e-13GeBP family protein