PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026413946.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 657aa MW: 72503.1 Da PI: 8.6656 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.6 | 0.00019 | 74 | 94 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H XP_026413946.1 74 CEICNKGFQRDQNLQLHRRGH 94 *******************88 PP | |||||||
2 | zf-C2H2 | 13.4 | 0.00022 | 148 | 170 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC++C+k + +s+ k H + + XP_026413946.1 148 YKCEKCSKKYAVQSDWKAHSKIC 170 9******************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 657 aa Download sequence |
MMSATDGSVS ANNPSSIMGF SQNSNPNPNQ AGAENTTTTP AIKKKRNLPG TPDPDAEVIA 60 LSPKSLMATN RFLCEICNKG FQRDQNLQLH RRGHNLPWKL KQRSSKEIRK KVYICPEKNC 120 VHHDPSRALG DLTGIKKHFS RKHGEKKYKC EKCSKKYAVQ SDWKAHSKIC GTKEYKCDCG 180 TLFSRKDSFI THRAFCDALA EESARFNPIA MPKNLSFRTD HHSLSMDARN NNPQSASLLH 240 AFNNREGLDA INDPQLCPIF RSDFTNPNMI NTSAFDTHER KPRLSLWLDN QSNSQLNQQI 300 NDIAANSDAF LASKSAGGVG FPELSQMGST NIFGTSSPPP IVNYPGGIPT QWMSRCNGES 360 TGVNLSLSTS PRGINKESDD LNQNSNNKGV MVENLASLYS SNNQSSPSSA SAAQHMSATA 420 LLQKAAQMGA TRSSPSFVGT YGVSSSSSDT TGFINPHHQH MDSTRNDFHQ LFRQQDKQQQ 480 QQQQQQQQQQ QPSSVQHDHD NNNLNQVVMM NTTNVNTDHH QQHQGLFSGL MNLSSLADSG 540 NNNLDRLMMS ATANNHNHED INNNQEDQNQ IKHQQSSPSG APPPRPLKQL RHTIGGDASS 600 SVPAQQDHSL TRDFLGVGAV HHNVSSPFLQ QEFVKFASMQ GSAMDQHFSR YSSGGSH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 99 | 111 | KLKQRSSKEIRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66730.1 | 1e-100 | C2H2 family protein |