PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026413942.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 344aa    MW: 37696.2 Da    PI: 4.9687
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026413942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA542.2e-17253286134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG+++++ +
  XP_026413942.1 253 CLHCEITKTPQWRAGPMGPKTLCNACGVRFKSGR 286
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MIGPGFIDEM DLDICGDFFD HIDDLLDFPS EEIEGNGGVI GGGDCNAFQD MWPSIPPPES  60
LVDPCSGFSN SSSDLSTELP VPHEDIVQLE WLSNFVEDSF SAGSIPLDTD FINNNKKDDS  120
HRFRTSSPVS VLESNSSCSG GKTMSLSPDT VVPGRARSKR PRPATFNPRP ALSFVSPVSS  180
ITNVQNLSMS NSYLSSESEN YAESHPPYIP NYDGTEQKKK KKKKKLTPSL PSYSSDLDDS  240
LQQQQPGVAV RKCLHCEITK TPQWRAGPMG PKTLCNACGV RFKSGRLFPE YRPAASPTFV  300
ASLHSNSHKK VLEMRVKGTP DDMNPMSPAP EFLPASNTHM LDYI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159163KRPRP
2218224KKKKKKK
3219225KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.28e-38GATA family protein