PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413794.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 416aa MW: 46743.6 Da PI: 7.3811

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.2	3.6e-07	248	270	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H XP_026413794.1 248 HYCQVCGKGFKRDANLRMHMRAH 270 68*******************99 PP
2	zf-C2H2	11.1	0.0012	346	369	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + XP_026413794.1 346 YVCNRCNqKQFSVLSDLRTHEKHC 369 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MISGNTNSSG FKQILYGVAD DVLSSSSLQD HTSSSNEDNK CQSNAFLYSF SVLKDKVHQV 60 QTLVNVAVLS QDQGVVQQPV ESVSMAIAGI RALLQEIIVN ASSMMFTCQQ LALTTESYIN 120 SSYVAGMGSN DMHQLWRVHK VDDEVVGLPP TQLSDPHPSH VQIGNETGGG GSFFSDEHLE 180 WYGDNYNNYN TTNVHDDITT TSSKKVVVEE MRLLNEVEKK EVRTDGCSPT NYELIELDAA 240 DLLAKYTHYC QVCGKGFKRD ANLRMHMRAH GEEYKSNAAL SNPRKSRNSN SMENNAECYS 300 ILVPIRKYSC PQEGCRWNKK HAKFQPLKSM ICVKNHYKRS HCPKMYVCNR CNQKQFSVLS 360 DLRTHEKHCG DLKWQCSCGT TFSRKDKLIG HCALFFGHIP AGNTSAKQEK FELHIE

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MISGNTNSSG FKQILYGVAD DVLSSSSLQD HTSSSNEDNK CQSNAFLYSF SVLKDKVHQV  60
QTLVNVAVLS QDQGVVQQPV ESVSMAIAGI RALLQEIIVN ASSMMFTCQQ LALTTESYIN  120
SSYVAGMGSN DMHQLWRVHK VDDEVVGLPP TQLSDPHPSH VQIGNETGGG GSFFSDEHLE  180
WYGDNYNNYN TTNVHDDITT TSSKKVVVEE MRLLNEVEKK EVRTDGCSPT NYELIELDAA  240
DLLAKYTHYC QVCGKGFKRD ANLRMHMRAH GEEYKSNAAL SNPRKSRNSN SMENNAECYS  300
ILVPIRKYSC PQEGCRWNKK HAKFQPLKSM ICVKNHYKRS HCPKMYVCNR CNQKQFSVLS  360
DLRTHEKHCG DLKWQCSCGT TFSRKDKLIG HCALFFGHIP AGNTSAKQEK FELHIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	3e-99	C2H2 family protein