PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413008.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 475aa MW: 53405.4 Da PI: 8.2131

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413008.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43.3	6.6e-14	49	136	2	98
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +k +++s+v + +l l kf+++ ++ ++++tl e+g++++ ++ + ++ l++GW++F+ a++L egD +v++l++ ++f +v + XP_026413008.1 49 VKLMLRSHVVQGFWLGLTSKFCSTLPKN---DTEVTLVGEDGEEYTANY--LPR--KFGLSGGWRGFATAHKLVEGDALVLQLVEATKF--KVYI 134 68999***************888544...568***********..554..588*********************9987777..8887 PP E- CS B3 97 fr 98 +r XP_026413008.1 135 VR 136 76 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MKSSSAMVIA SGKKNDVRLM TEVEKPKSLV EVRAEEIQFG LDPQFPSLVK LMLRSHVVQG 60 FWLGLTSKFC STLPKNDTEV TLVGEDGEEY TANYLPRKFG LSGGWRGFAT AHKLVEGDAL 120 VLQLVEATKF KVYIVRAHSL ANVEVASSLL KSGIPAKGSD QADAEERKTG IKYTRKHILC 180 RPAVPLIGED QHIVPPLKSC KEMKMTKSPA QKHVKSHLSV PFLGDDQDAT LPTSGPKETT 240 ATDDPIRKRV KFHPSVLHLG GDQNITLPLS SSKQPEDQSN RKDTEVLEGI KRLDSSVEIR 300 DVTDLESFTI TVNGWIIDPE MSENYRSKYY ELCRSQKTYL HKNLMQGVNS KLVAGIICET 360 VDIADAIRAS ELGTPKDDFK AWRKSLIGFK HLGMNVDVLL SRIDILLKLM MEAEDSFDYN 420 ETMVRRNRVK REIAALDMKI LELRNEAVRL EREVKALQVN EEKHEAFYSV VRSPW

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MKSSSAMVIA SGKKNDVRLM TEVEKPKSLV EVRAEEIQFG LDPQFPSLVK LMLRSHVVQG  60
FWLGLTSKFC STLPKNDTEV TLVGEDGEEY TANYLPRKFG LSGGWRGFAT AHKLVEGDAL  120
VLQLVEATKF KVYIVRAHSL ANVEVASSLL KSGIPAKGSD QADAEERKTG IKYTRKHILC  180
RPAVPLIGED QHIVPPLKSC KEMKMTKSPA QKHVKSHLSV PFLGDDQDAT LPTSGPKETT  240
ATDDPIRKRV KFHPSVLHLG GDQNITLPLS SSKQPEDQSN RKDTEVLEGI KRLDSSVEIR  300
DVTDLESFTI TVNGWIIDPE MSENYRSKYY ELCRSQKTYL HKNLMQGVNS KLVAGIICET  360
VDIADAIRAS ELGTPKDDFK AWRKSLIGFK HLGMNVDVLL SRIDILLKLM MEAEDSFDYN  420
ETMVRRNRVK REIAALDMKI LELRNEAVRL EREVKALQVN EEKHEAFYSV VRSPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	425	432	RRNRVKRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	1e-34	B3 family protein