PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026412578.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 203aa    MW: 22911.3 Da    PI: 4.8982
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026412578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.5e-102971754
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                     +ErrRR ++N+++  Lr  +P  +       ++Ka++L  A+ YI+ L
  XP_026412578.1 29 DAERRRRGKLNQRIKDLRAAVPIiS------NMTKAATLDDAITYINAL 71
                    68*********************66......7**************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MKFAGCGSGR GRGKLDEHGI MEFKSKNLDA ERRRRGKLNQ RIKDLRAAVP IISNMTKAAT  60
LDDAITYINA LKQQVDGLSD CLEQMDTTVL PRAVEEEETQ VQVELDQDVE KCSIDEEVKV  120
SYLEENKLCI KIICYSRRGI FTTLLELMTT LGFEIMDNNF SSFKGVCLTT LSVKGSKVEV  180
TELEKLEEYL LQAVTSLNNN FKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.12e-29bHLH family protein