PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026411985.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 359aa    MW: 40104.2 Da    PI: 5.28
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026411985.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.76e-17286320135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C +  Tp+WR gp g+ktLCnaCG+++++ +l
  XP_026411985.1 286 CAHCLSQRTPQWRAGPLGPKTLCNACGVRFKSGRL 320
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MDFYRNMSVV TGGGGGVENG GFPSSDYPQE QFVVSPSSTT YSKLGVVSSS SCCSVDDLFS  60
TQNMEAGDVN IEWLSNLVED CLSNTGNCIN QPLPTNDHQP LNVKKHYSPV SLADNHSTAP  120
TSPSLQNYLS IPTGNIRTKR RRTTKLPRKP FSNSSIRSSN SSKINSGSWS SHHQGAKDPQ  180
NQNPNHHHVV MASEYMTPLL VHQAYWLADS ELINVPQNEN TNNNSTSTTI FTTTTTTIDE  240
DDEQEEIMMK MEEEEEEEEE EEEEEEEEEE GRRKDSLGNL GQPRRCAHCL SQRTPQWRAG  300
PLGPKTLCNA CGVRFKSGRL LPEYRPAKSP TFVSYKHSNS HKKVLEMRMS ILPSSIRSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-34GATA family protein