PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026410635.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 387aa MW: 43074.9 Da PI: 9.2392

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026410635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0012	94	113	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C Cgk Fs+ +L H+r XP_026410635.1 94 TCLECGKNFSSLKSLYGHLR 113 7*****************98 PP
2	zf-C2H2	17.1	1.5e-05	345	367	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++CgksF + + L H r H XP_026410635.1 345 YPCGICGKSFATGYALGGHKRAH 367 99*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MNDFKPSSDF SEIHPIELSN QVGFDQMSIN DSQSRIIFRV RKNSDFGGGG VDKETPFQKQ 60 ELKFYQRKPK NLMEETKMGA ETVSNKSELN NGTTCLECGK NFSSLKSLYG HLRCHPKREK 120 KMIVDDRNKN SPSISGRLLG CDWLCSLSGW VITGRRGRKG FPSAIEREAL NGLLMLVNGN 180 SLDLERKRTR YQAVNREISR KRSKLDGDNG GIGIECGSKL MNVESRMEKL DGFGKVLGKD 240 IQVDEVHLGN PTYTGCVIPV YLSSSTGNLT KKFSQYGMMN CNNQTTMRST NAGTLHCYQA 300 LGCHESSVKA EVEELSIPER NLTQADYDVQ KFNASTIMQN NVKTYPCGIC GKSFATGYAL 360 GGHKRAHRNA PRKHLSTPFL EEALAVG

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MNDFKPSSDF SEIHPIELSN QVGFDQMSIN DSQSRIIFRV RKNSDFGGGG VDKETPFQKQ  60
ELKFYQRKPK NLMEETKMGA ETVSNKSELN NGTTCLECGK NFSSLKSLYG HLRCHPKREK  120
KMIVDDRNKN SPSISGRLLG CDWLCSLSGW VITGRRGRKG FPSAIEREAL NGLLMLVNGN  180
SLDLERKRTR YQAVNREISR KRSKLDGDNG GIGIECGSKL MNVESRMEKL DGFGKVLGKD  240
IQVDEVHLGN PTYTGCVIPV YLSSSTGNLT KKFSQYGMMN CNNQTTMRST NAGTLHCYQA  300
LGCHESSVKA EVEELSIPER NLTQADYDVQ KFNASTIMQN NVKTYPCGIC GKSFATGYAL  360
GGHKRAHRNA PRKHLSTPFL EEALAVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26590.1	5e-09	C2H2 family protein