PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026409993.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 446aa MW: 50199.8 Da PI: 4.7191

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026409993.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.6	6.8e-06	255	297	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 E+ R+++ + f L l+P++ K++ a++L +++YI++L XP_026409993.1 255 STEKMKREKLGDQFRALSLLVPNP-----SKPDRASVLASTIDYINEL 297 579999***************9.....7*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MMYDHSETHY FDPHSIQVGV QNESTFATAA MDFQLDQKFN NAHLMQEVIV IEDEPSPVQS 60 GSIDCNVHHQ QEMNVYKEIQ EPNTHYHQQE QFYDQQQIDE LQHLSTDGVD LGSCSTSLPN 120 FYLEIFGESS YNDEVVYGGE NGSGSIDVLY ENDPMSLNLN NLPPSQPPVR ESFEALPQNY 180 GVSCSLFGGK MDDSTKEVYQ QQYGADNNEM RQFDNLVADF KREMNNNIHG VGGSRARSTN 240 GLGIASHGNK QHITSTEKMK REKLGDQFRA LSLLVPNPSK PDRASVLAST IDYINELKGT 300 VDYLKVLIDK KRNERNKKSR IENEAVAGDM PTSSTTNIDR DQNSFNGQVR SSWSQRKSKD 360 AEVDVRMIDG DVTIQLIVQR PKMINLLLGV SSIFDELQLD LLHISSGCIG DYYSFWFNIK 420 ILTGSSVFAS AIAKKLIEGV EKTIQH

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MMYDHSETHY FDPHSIQVGV QNESTFATAA MDFQLDQKFN NAHLMQEVIV IEDEPSPVQS  60
GSIDCNVHHQ QEMNVYKEIQ EPNTHYHQQE QFYDQQQIDE LQHLSTDGVD LGSCSTSLPN  120
FYLEIFGESS YNDEVVYGGE NGSGSIDVLY ENDPMSLNLN NLPPSQPPVR ESFEALPQNY  180
GVSCSLFGGK MDDSTKEVYQ QQYGADNNEM RQFDNLVADF KREMNNNIHG VGGSRARSTN  240
GLGIASHGNK QHITSTEKMK REKLGDQFRA LSLLVPNPSK PDRASVLAST IDYINELKGT  300
VDYLKVLIDK KRNERNKKSR IENEAVAGDM PTSSTTNIDR DQNSFNGQVR SSWSQRKSKD  360
AEVDVRMIDG DVTIQLIVQR PKMINLLLGV SSIFDELQLD LLHISSGCIG DYYSFWFNIK  420
ILTGSSVFAS AIAKKLIEGV EKTIQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31220.1	5e-44	bHLH family protein