PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026409839.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 320aa    MW: 34695.5 Da    PI: 7.4325
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026409839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.95.4e-09170205133
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...T CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...k 33 
                      r+ WT+e+d  l+ +vk++G+++W+ I ++ g   k
   XP_026409839.1 170 RMHWTAEDDNELIAVVKKFGKRNWADILKRWGilrK 205
                      788*************************99887554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MASSDFDTQR GRKGFISEKD IALVLTRYSA PTILALLKEI AQYPDVKIDW NVLVNKTTSG  60
ITNAAKYQKL RRHLAYCDKL PEIIEEKIEE QPLEEDDSDL EYELEALCPV NDEASLEAAG  120
GGSATVEAPL TINIPTWQDY KMTTTVLRTA EEGLDATASN AGGQPEKGKR MHWTAEDDNE  180
LIAVVKKFGK RNWADILKRW GILRKGLKLE TGGGDLIARQ RATNRSVSSA LNMPIINSLL  240
AAYAASVVPN PMVQEAIVAA GARIATPLTA KSLRRAARSK KSSMPGVHYI CTDLSSASPT  300
TYSTSAPSVS PPPPTPAVKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58220.11e-18MYB_related family protein