PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026409314.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 361aa MW: 40355.7 Da PI: 4.6791

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026409314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.7	1.2e-35	30	122	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y+++ed +++++isw+e+g++f+v+ + efa+++Lpk+Fkh+nf+SFvRQLn+YgF+k+ ++ weF ++ Fk+g+k+ll++ XP_026409314.1 30 FLTKTYQLVEDTTVDDIISWNEDGTTFIVWRPAEFARDLLPKFFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFCNDCFKRGEKKLLSD 115 9***************************************************************99.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k + XP_026409314.1 116 IQRRKVS 122 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MVEPQQQNGE TESLSQQQQS QQKSSLPTPF LTKTYQLVED TTVDDIISWN EDGTTFIVWR 60 PAEFARDLLP KFFKHNNFSS FVRQLNTYGF RKIVPDRWEF CNDCFKRGEK KLLSDIQRRK 120 VSSTSSPSPP VVTTTTTTTT TVVVAAGSPT DSGDEQVLSS NSSPSTSLIP PVMMASNTIN 180 YIRPGGGCSS SSTNSELVEE NERLRKENQL LSQELKQMKN LCNNIFALMT KYNASTNLHG 240 ETEAEDEENK SGGGGGNGFP VEKSMEFLSL KRFCDDNDAI TGGVSDGSRL KAETEEDTSS 300 TRLFGVPIRV KRVRTEDDEE NDRNEELVKP EPSDSDSKKV VDDESRWLKK CNSLPNQRLC 360 L

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MVEPQQQNGE TESLSQQQQS QQKSSLPTPF LTKTYQLVED TTVDDIISWN EDGTTFIVWR  60
PAEFARDLLP KFFKHNNFSS FVRQLNTYGF RKIVPDRWEF CNDCFKRGEK KLLSDIQRRK  120
VSSTSSPSPP VVTTTTTTTT TVVVAAGSPT DSGDEQVLSS NSSPSTSLIP PVMMASNTIN  180
YIRPGGGCSS SSTNSELVEE NERLRKENQL LSQELKQMKN LCNNIFALMT KYNASTNLHG  240
ETEAEDEENK SGGGGGNGFP VEKSMEFLSL KRFCDDNDAI TGGVSDGSRL KAETEEDTSS  300
TRLFGVPIRV KRVRTEDDEE NDRNEELVKP EPSDSDSKKV VDDESRWLKK CNSLPNQRLC  360
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	3e-69	HSF family protein