PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026408207.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 173aa MW: 19166.2 Da PI: 10.1969 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41 | 3.5e-13 | 1 | 44 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++Er+RR+++N++f L ++P + kK++Ka++L A++Y+k+Lq XP_026408207.1 1 MAERKRRQKLNQRFIALSAVVPGL-----KKMDKASVLGDAIKYLKQLQ 44 58**********************.....9******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 173 aa Download sequence |
MAERKRRQKL NQRFIALSAV VPGLKKMDKA SVLGDAIKYL KQLQQKAKTL EEQNVGKTVE 60 SVIFLKKTQI YADDKISSSS KENSAAGSTY DEPLPEIEAR VSQNNVLIRI HCEKHNGVFA 120 KILSQIEKLH LSVISSHAIP FNDSSLAITI TAQMNAEYSM TVKALVKSLP SVV |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 3 | 8 | ERKRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G22760.1 | 1e-48 | bHLH family protein |