PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026407076.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 384aa MW: 41646.4 Da PI: 9.6515

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026407076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.8	2.7e-36	87	187	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.........eaesssssasnsss 87 ++ + +++++hTkv+gR+RRvR++a+caar+F+L++eLG+++d++ti WLl+ a+p+i+++tgt++++a ++ +++ ss++++n+ XP_026407076.1 87 TTTRASTKDRHTKVEGRGRRVRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPSIIAATGTGTIPAIAMsiggtlkipTTSPSSNTVNNK-- 179 567899**********************************************************77777333322222221111111111111.. PP TCP 88 g......k 89 + XP_026407076.1 180 QilvdvgT 187 12343321 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MASIQKQEEV DQESIRNNPP LTVSQPPPPP PQTPGDPVTT EQKAQSIQQV ISLMKEEQEE 60 VIEDEIHEAL PIQQIPPLQK NTQIKKTTTR ASTKDRHTKV EGRGRRVRMP ATCAARIFQL 120 TRELGHKSDG ETIRWLLEHA EPSIIAATGT GTIPAIAMSI GGTLKIPTTS PSSNTVNNKQ 180 ILVDVGTADQ NQIKKRKRPE NSEFFDISTT TTDGVSVSSG LAPISRITTS ATTGVIGAAQ 240 AQPPPPQGFM PMWAFSNPSN TAGTFWMIPP NSAIATGPVV SSLQPQLWSF PSTVTPLVNI 300 STRPISSFIT MQPSIIQLHH PVIPPPPTNT IFPNSPVPKS SNKSAMSPAS SSTPTITTTT 360 TTQMLREFSL EILDRQELQL MGRK

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MASIQKQEEV DQESIRNNPP LTVSQPPPPP PQTPGDPVTT EQKAQSIQQV ISLMKEEQEE  60
VIEDEIHEAL PIQQIPPLQK NTQIKKTTTR ASTKDRHTKV EGRGRRVRMP ATCAARIFQL  120
TRELGHKSDG ETIRWLLEHA EPSIIAATGT GTIPAIAMSI GGTLKIPTTS PSSNTVNNKQ  180
ILVDVGTADQ NQIKKRKRPE NSEFFDISTT TTDGVSVSSG LAPISRITTS ATTGVIGAAQ  240
AQPPPPQGFM PMWAFSNPSN TAGTFWMIPP NSAIATGPVV SSLQPQLWSF PSTVTPLVNI  300
STRPISSFIT MQPSIIQLHH PVIPPPPTNT IFPNSPVPKS SNKSAMSPAS SSTPTITTTT  360
TTQMLREFSL EILDRQELQL MGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	4e-47	TCP family protein