PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026406636.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 675aa MW: 74703 Da PI: 5.3472

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026406636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.8	1.7e-12	493	538	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_026406636.1 493 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAIAYINEL 538 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence
MTDYRLPTMN LWTDDNSSMM DAFMASDLSS PFAGANSWPP SSSASTITSD QQQQQQQQQL 60 QQPVVFNQET LQQRLQILIE GARESWTYAI FWQSSVDNTG VSFLGWGDGY YKGEEDRLKR 120 KTTPSSLAEQ EHRKKVLREL NSLISGVPAS ADDPVDEEVT DTEWFFLVSM TQSFINGGGL 180 PGQAFFSSYP VWLTGNDRLL SSTCDRAKQA QLFGLQTMVC IPLANGVVEL GSTEIIFQSS 240 DLMNKVRILF NFNSPDNGSW PVSSSQQQQQ NDQGENDPSL LWISEPTPVL EIKESSSVPP 300 VVAEVSKPVI QFENHSSSSL TENPSSSIVH VQQQTQIQTQ TQTFFTRELN FSEYGFDGSS 360 TKNSSHHQPS SCKPESGEIL SFGDSSKRNS SSAVNGNIFS NNSQFAQDDK KKKKSVTSKG 420 SNNDEAVFSF TSGVVIPSSG VVKSNGAGGT VDSDHSDLEA SVREAESSRV VDTEKRPRKR 480 GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNVS KMDKASLLGD AIAYINELRT 540 KLQNTESDKE GLVSQVDSLK KELSCKDTRS SSVSAAPPDP DLKLLNHIGN KSPDVDIDVK 600 ILGWEAMIRI QCNKKNHPAA RLMVALKELD LDVNYASVSV VKDLMIQQAT VKMSSRLYTQ 660 EQLRSALASR VADHR

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence

MTDYRLPTMN LWTDDNSSMM DAFMASDLSS PFAGANSWPP SSSASTITSD QQQQQQQQQL  60
QQPVVFNQET LQQRLQILIE GARESWTYAI FWQSSVDNTG VSFLGWGDGY YKGEEDRLKR  120
KTTPSSLAEQ EHRKKVLREL NSLISGVPAS ADDPVDEEVT DTEWFFLVSM TQSFINGGGL  180
PGQAFFSSYP VWLTGNDRLL SSTCDRAKQA QLFGLQTMVC IPLANGVVEL GSTEIIFQSS  240
DLMNKVRILF NFNSPDNGSW PVSSSQQQQQ NDQGENDPSL LWISEPTPVL EIKESSSVPP  300
VVAEVSKPVI QFENHSSSSL TENPSSSIVH VQQQTQIQTQ TQTFFTRELN FSEYGFDGSS  360
TKNSSHHQPS SCKPESGEIL SFGDSSKRNS SSAVNGNIFS NNSQFAQDDK KKKKSVTSKG  420
SNNDEAVFSF TSGVVIPSSG VVKSNGAGGT VDSDHSDLEA SVREAESSRV VDTEKRPRKR  480
GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNVS KMDKASLLGD AIAYINELRT  540
KLQNTESDKE GLVSQVDSLK KELSCKDTRS SSVSAAPPDP DLKLLNHIGN KSPDVDIDVK  600
ILGWEAMIRI QCNKKNHPAA RLMVALKELD LDVNYASVSV VKDLMIQQAT VKMSSRLYTQ  660
EQLRSALASR VADHR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	475	483	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein