PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026406584.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 844aa    MW: 93938.7 Da    PI: 6.2062
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026406584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.82.4e-20121176156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e+lF+++++p+ ++r +L++ lgL+ rqVk+WFqNrR+++k
  XP_026406584.1 121 KKRYHRHTARQIQEMEALFKECPHPDDKQRMRLSQDLGLKPRQVKFWFQNRRTQMK 176
                     688899***********************************************998 PP
2START161.94.8e-513265523206
                     HHHHHHHHHHHHHHC-TT-EEEE..EXCCTTEEEEEEESSS.............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
           START   3 aeeaaqelvkkalaeepgWvkss..esengdevlqkfeeskv............dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                     a  a++elvk+ +a+ep+W +    + +n +e  + f+                +++ea r+s+vv+m++ +lv  +ld + +W e ++    +a
  XP_026406584.1 326 AMNAMDELVKMCQAAEPLWIRCNnkDVLNVEEHAKMFPW--PvmnnnqkqheneFQVEATRDSAVVFMNSITLVDAFLDAN-KWMELFPsivsRA 417
                     6689*****************998844444444444432..02455566667889**************************.************* PP

                     EEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEE CS
           START  80 etlevissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtw 166
                     +t++ is+g      + l+lm ae+q+l+pl p R+  f+Ry+ q  ++g+w+ivd  +d+    + +ss+ R ++ pSg++i++++ng+s+v+w
  XP_026406584.1 418 KTVQIISTGvlghasNSLHLMHAEFQVLTPLIPtREAQFLRYCHQnAEEGTWAIVDFPIDNFHADNIQSSSLRYRRKPSGCIIQDMPNGYSRVIW 512
                     *************************************************************999999**************************** PP

                     EE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 167 vehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     veh++l+ + +h++++++v+sg+a+ga +w+a lq+qce+
  XP_026406584.1 513 VEHAELEHKPVHQIFNQFVSSGMAFGAHRWLAVLQQQCER 552
                     **************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 844 aa     Download sequence    
MYGDCQVMSS MGGGGNNNNI VSTTAPDHHH QHLFSSPIRN PNNINYNFMS NSMVPSYHPY  60
ASIIPKEEVG LQMIIGNNKE DDMESGSADG SGHIHDQGGT NSADDELLLQ ETDQQQQNPK  120
KKRYHRHTAR QIQEMEALFK ECPHPDDKQR MRLSQDLGLK PRQVKFWFQN RRTQMKAQQD  180
RSDNIILRAE NDNLKNENYR LQAALRNVSC PNCGGAAILG EMSLDEQHLR LENARLKEEL  240
ERLACIAPRF NVRQMQALGH VPHHLAPSLE LDMGIYSRNF QEPQLGNCRD IMSMSSCNMP  300
ENQHELQIAG CCLILDQEKP LAMQFAMNAM DELVKMCQAA EPLWIRCNNK DVLNVEEHAK  360
MFPWPVMNNN QKQHENEFQV EATRDSAVVF MNSITLVDAF LDANKWMELF PSIVSRAKTV  420
QIISTGVLGH ASNSLHLMHA EFQVLTPLIP TREAQFLRYC HQNAEEGTWA IVDFPIDNFH  480
ADNIQSSSLR YRRKPSGCII QDMPNGYSRV IWVEHAELEH KPVHQIFNQF VSSGMAFGAH  540
RWLAVLQQQC ERFASLMARN ISDLGGVIPN SESRKNLMKL SHRMMRTFCF NISCSGGQSW  600
TVLSETSVDT VRITTRKSID PGQPSGLILC AVSTTWLPFS HQQVFEFLRD ERRRSQQLDV  660
LSGGTSSQEI AHIANGSDPG NCISLLRINA ASNSAQNVEL MLQESCTDSL GSMVVYTTID  720
VDSVQQTMNG GDSSYFPILP LGFVIYPADH INNNGENGPA SSSDDQVNGP TSGCLLTVGI  780
QILASTIPGA KLNFSSATAI NNHICNAVHQ INAVLSSSNN HSSGSPDGCH TAGGSCPEPS  840
AASE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein