PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026406423.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family BBR-BPC
Protein Properties Length: 354aa    MW: 40126.2 Da    PI: 9.9279
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026406423.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind253.61.2e-7710835452301
       GAGA_bind  52 avaerdmaflqrdkalaernkalverdnkllalllvenslasalpvgvqvlsgtksidslqqlse......pqledsavelreeeklealpieea 140
                      +++++ afl+  ++ + r+  + e +  l a+ ++++  +++     + l+ tk  ++   +++        + +++ +++    ++  +  + 
  XP_026406423.1 108 QHQHHQAAFLKMGMYPN-RHSMISESETDLNAVDYANHCWVHQR----SFLPPTKASQTPILTTHintetgLPVIPTSLGMPIDGPIQDDEFGT- 196
                     44444555544433333.24444555555555555555544333....3333333333333333311111144444555555555555555444. PP

       GAGA_bind 141 aeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCC 235
                      +++k+kk++++++++k++k+ k+k++kkks++s+kk+ ++   +++ +ekk++d+ ++g ++D s++P+PvCsCtG++rqCY+WG+GGWqS+CC
  XP_026406423.1 197 -KSSKTKKQSSAKKSEKVAKVLKTKEPKKKSAASTKKKGNSI--STAIREKKNLDIIIDGSAMDFSQVPTPVCSCTGMPRQCYRWGAGGWQSSCC 288
                     .45555666666788888888888888887777655554444..678999********************************************* PP

       GAGA_bind 236 tttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     tt++S yPLP+st+r+g+R+agrKmS+ga+ klL++L+ eGydls+++DLkdhWAkHGtnkfvti+
  XP_026406423.1 289 TTNLSEYPLPMSTTRPGSRLAGRKMSNGAYGKLLQRLTVEGYDLSHAIDLKDHWAKHGTNKFVTIK 354
                     *****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MEEKVGLGIR NWDFSKQTVT DHAVLKPVSG IPVSSSTTTE HQPHPHHYHQ HQHHQHQQHQ  60
HQHQHQHHQQ QQHQLQLQHQ HQHQHQHLQQ HPHPHPQPLP HLQLQEQQHQ HHQAAFLKMG  120
MYPNRHSMIS ESETDLNAVD YANHCWVHQR SFLPPTKASQ TPILTTHINT ETGLPVIPTS  180
LGMPIDGPIQ DDEFGTKSSK TKKQSSAKKS EKVAKVLKTK EPKKKSAAST KKKGNSISTA  240
IREKKNLDII IDGSAMDFSQ VPTPVCSCTG MPRQCYRWGA GGWQSSCCTT NLSEYPLPMS  300
TTRPGSRLAG RKMSNGAYGK LLQRLTVEGY DLSHAIDLKD HWAKHGTNKF VTIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.31e-61BBR-BPC family protein