PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026405210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 320aa MW: 34963.8 Da PI: 6.9902 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 140.8 | 4.4e-44 | 8 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv kll+++ +++reda++sl+yeAear+rdPvyG+vgvi++lq++l+q++++l XP_026405210.1 8 PCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNEITPTQREDAVNSLAYEAEARLRDPVYGCVGVISTLQHRLKQVEHDLY 102 7********************************************************************************************99 PP DUF260 96 llkee 100 +k+e XP_026405210.1 103 NAKKE 107 98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence |
MASSSNSPCA ACKFLRRKCT QECVFAPYFP PDQPQKFANV HKVFGASNVA KLLNEITPTQ 60 REDAVNSLAY EAEARLRDPV YGCVGVISTL QHRLKQVEHD LYNAKKELST FIGPAALLPL 120 AQHPHHPHHH PLLHHAQNPN SPVGVVAGGG GGAYGISSLG LGLPTGPTQQ AHLLMREQQQ 180 QQQQHIIDPQ QLAAVIAARE QQDMMRSYEQ QQQQQQQELV RFNSGFDGVA NGTGGGGGVL 240 FNQMGSGVPS PLSLVTFDNN NNNNSPFQIQ QQQQQQHIQE NHHQPQQHQQ PPPQLQIQPE 300 TPQQQRSGSD EGTSVGGPSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66870.1 | 1e-66 | LBD family protein |