PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026404309.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 488aa MW: 54490.8 Da PI: 6.5147

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026404309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.2	1.8e-13	437	486	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 + +W+++E++ l dav+++G g+W++I ++ + Rt+ ++k++w++ XP_026404309.1 437 KRKWSPQEEQALRDAVTKHGRGNWTLILNKNRdvfEDRTAGDLKDKWRNM 486 579*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MDPDIAGVIM EFLVRVPTLE DSIIKTLLEK LPIRKDDHRL IKCILLRSLS VECSKGEVSE 60 NTLVTLERIE ESDYTQGVST LDSMSEAYCS VAVHCAVVHL KKIPIDFHSY LDAVVRIWRG 120 RIHDMEKCEG VGLYSDKLKE MRCVIEEALW NESVRQRVLT CDTRGDAVRF VKVFLEDAMK 180 QVGPSMIEIA VSSLTAKGKE VFIPPSNLLS KHPEDGRVSD APHCDVHVHE SNLGNDGNDV 240 ALGSGMEISH AVNAKNNLPT PEIEIVKEAR KTSTADLQSV VEETLPRASK RKYNLSTPEV 300 KTVQEALKSS LSDLQAMVKD PLPDALRVAK AISASIAREA TTQQNFVLVD EGGEASCAPS 360 VDKGVTSAEA NETRNQNTTT RPSLMGRNST AHTYEWNEDS IESSQERSPD HPHLPTPRRV 420 VVSPLVKHEV GNHKRMKRKW SPQEEQALRD AVTKHGRGNW TLILNKNRDV FEDRTAGDLK 480 DKWRNMTR

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MDPDIAGVIM EFLVRVPTLE DSIIKTLLEK LPIRKDDHRL IKCILLRSLS VECSKGEVSE  60
NTLVTLERIE ESDYTQGVST LDSMSEAYCS VAVHCAVVHL KKIPIDFHSY LDAVVRIWRG  120
RIHDMEKCEG VGLYSDKLKE MRCVIEEALW NESVRQRVLT CDTRGDAVRF VKVFLEDAMK  180
QVGPSMIEIA VSSLTAKGKE VFIPPSNLLS KHPEDGRVSD APHCDVHVHE SNLGNDGNDV  240
ALGSGMEISH AVNAKNNLPT PEIEIVKEAR KTSTADLQSV VEETLPRASK RKYNLSTPEV  300
KTVQEALKSS LSDLQAMVKD PLPDALRVAK AISASIAREA TTQQNFVLVD EGGEASCAPS  360
VDKGVTSAEA NETRNQNTTT RPSLMGRNST AHTYEWNEDS IESSQERSPD HPHLPTPRRV  420
VVSPLVKHEV GNHKRMKRKW SPQEEQALRD AVTKHGRGNW TLILNKNRDV FEDRTAGDLK  480
DKWRNMTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06910.1	2e-12	MYB_related family protein