PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026403644.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 504aa MW: 55465.9 Da PI: 7.4831

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026403644.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.9	2.2e-41	197	273	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC+ dl++akeyhrrh+vCe hsk p+v+v+gle+rfCqqCsrfh+l efDe+krsCrrrL++hn+rrrk+ XP_026403644.1 197 RCQVEGCDLDLTSAKEYHRRHRVCESHSKFPNVTVAGLERRFCQQCSRFHDLAEFDEKKRSCRRRLNDHNSRRRKPP 273 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MSSCSVMEWN TKTALQWDWE NLVMFSGKVN EIPNKTSQQP TDWGVEGDGG GIDNGSFYLP 60 SGGGRGGAGA GGHSGSDLGN GSSSKSSISA SIDSSGKVGS SKSKFNLDTI EDSTNHPTRK 120 RELGRVEDTG SSPTVGVSVV GSGEPLIGLK LGKRTYFEDV CAGSLVKPSS YTVIPAASAA 180 AVTKRSRASY QSMQTPRCQV EGCDLDLTSA KEYHRRHRVC ESHSKFPNVT VAGLERRFCQ 240 QCSRFHDLAE FDEKKRSCRR RLNDHNSRRR KPPPESIHFS SGRLSSPFYD GRQQMSFILN 300 RVPLVHTTYP ALNPTWERRT AKPEGVDAHH SSNNELLNSI SSIHRDSGRL LSFKDTSVEV 360 VDQEGLEAST LAASNLDPTT DFRRALSLLS RNSSWDSSGT DHPEPSSLNQ LIHANHTGIA 420 QQQPVIQQSS VPHGWPTAST MEYWHPSEQQ QPTVATSHFQ EQQQQQQYPN SSQSQNNNTG 480 SHFQEFQLFK TPYENGFFSP NQLT

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MSSCSVMEWN TKTALQWDWE NLVMFSGKVN EIPNKTSQQP TDWGVEGDGG GIDNGSFYLP  60
SGGGRGGAGA GGHSGSDLGN GSSSKSSISA SIDSSGKVGS SKSKFNLDTI EDSTNHPTRK  120
RELGRVEDTG SSPTVGVSVV GSGEPLIGLK LGKRTYFEDV CAGSLVKPSS YTVIPAASAA  180
AVTKRSRASY QSMQTPRCQV EGCDLDLTSA KEYHRRHRVC ESHSKFPNVT VAGLERRFCQ  240
QCSRFHDLAE FDEKKRSCRR RLNDHNSRRR KPPPESIHFS SGRLSSPFYD GRQQMSFILN  300
RVPLVHTTYP ALNPTWERRT AKPEGVDAHH SSNNELLNSI SSIHRDSGRL LSFKDTSVEV  360
VDQEGLEAST LAASNLDPTT DFRRALSLLS RNSSWDSSGT DHPEPSSLNQ LIHANHTGIA  420
QQQPVIQQSS VPHGWPTAST MEYWHPSEQQ QPTVATSHFQ EQQQQQQYPN SSQSQNNNTG  480
SHFQEFQLFK TPYENGFFSP NQLT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	254	271	KKRSCRRRLNDHNSRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	4e-47	SBP family protein