PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026402795.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 640aa MW: 68561.1 Da PI: 9.0338

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026402795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16	3.3e-05	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_026402795.1 74 FICEVCNKGFQREQNLQLHRRGH 96 89*******************88 PP
2	zf-C2H2	12.4	0.00049	150	172	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ XP_026402795.1 150 WKCDKCSKRYAVQSDWKAHSKTC 172 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 640 aa Download sequence
MAAASSSSFF GTREEDQNQM MKQQQQQQSS TPTSSTAPVT APAQKKKRNL PGTPNPDAEV 60 IALSPKTLMA TNRFICEVCN KGFQREQNLQ LHRRGHNLPW KLKQKTTKEV KRRVYLCPEV 120 TCVHHDPSRA LGDLTGIKKH FCRKHGEKKW KCDKCSKRYA VQSDWKAHSK TCGTREYRCD 180 CGTLFSRRDS FITHRAFCDA LAQESARLPT GLSTMGSHLY GSNSNMGLGL SQVGSQLSSL 240 QDQSQPSTDL LRLGGAGGTQ FDHLMPPSAP SPFRSSQTTP SSAFFLPNSN QEFHDHQEPP 300 SHHGLLQNKP FHGLMQLPEL QNPTTNNSPS AAVAAAANLF NLSFFSNSST TSSNANNGNN 360 ISSSSLLLSD QFNNGNPGGD QGNIFSGNIM GDQNIGSNVS SLYNGSGQND TAVPQMSATA 420 LLQKAAQMGS TTSGNNAMLR GFGSSSSTSA RPSDNRAHLS TNFRGSFGGN GSGGSGGGGG 480 ESLRSQIENE NHLQDLMNSL ANGNSSIFGG GSSGGTNTFG GNNNTGGQES NFGGFNSNRV 540 TLEQQQQQQH HQHGSSNMSS MEDPKLHQNL TVSMGGSDRL TRDFLGVGGG MVRSMGGGIS 600 QRDQQQQQQQ QQHHNSDLSS LDSEMKSGSA NRSFGGGNLQ

Sequence ? help Back to Top

Protein Sequence Length: 640 aa Download sequence

MAAASSSSFF GTREEDQNQM MKQQQQQQSS TPTSSTAPVT APAQKKKRNL PGTPNPDAEV  60
IALSPKTLMA TNRFICEVCN KGFQREQNLQ LHRRGHNLPW KLKQKTTKEV KRRVYLCPEV  120
TCVHHDPSRA LGDLTGIKKH FCRKHGEKKW KCDKCSKRYA VQSDWKAHSK TCGTREYRCD  180
CGTLFSRRDS FITHRAFCDA LAQESARLPT GLSTMGSHLY GSNSNMGLGL SQVGSQLSSL  240
QDQSQPSTDL LRLGGAGGTQ FDHLMPPSAP SPFRSSQTTP SSAFFLPNSN QEFHDHQEPP  300
SHHGLLQNKP FHGLMQLPEL QNPTTNNSPS AAVAAAANLF NLSFFSNSST TSSNANNGNN  360
ISSSSLLLSD QFNNGNPGGD QGNIFSGNIM GDQNIGSNVS SLYNGSGQND TAVPQMSATA  420
LLQKAAQMGS TTSGNNAMLR GFGSSSSTSA RPSDNRAHLS TNFRGSFGGN GSGGSGGGGG  480
ESLRSQIENE NHLQDLMNSL ANGNSSIFGG GSSGGTNTFG GNNNTGGQES NFGGFNSNRV  540
TLEQQQQQQH HQHGSSNMSS MEDPKLHQNL TVSMGGSDRL TRDFLGVGGG MVRSMGGGIS  600
QRDQQQQQQQ QQHHNSDLSS LDSEMKSGSA NRSFGGGNLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-116	C2H2 family protein