PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026401922.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family BBR-BPC
Protein Properties Length: 352aa    MW: 39801.8 Da    PI: 9.9278
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026401922.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind240.71e-736335214301
       GAGA_bind  14 yepaaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalll..vensla.............s 93 
                     ++++++l+++++ ql                    +++ ++++   + q    l+ +++++ +++ ++l++ +  +++s+              +
  XP_026401922.1  63 HQHQHQLQHQQQHQLQHQH----------------QHQHLQQHPLPHPQPLPHLHPQEQQHQHHQAAFLKMGMypNRHSMIsesetdlnavdyaN 141
                     1111222222222222222................222223333444444445555555555555555444320023333333333333333332 PP

       GAGA_bind  94 alp.vgvqvlsgtksidslqqlse......pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkke 181
                     ++  ++ + l+ tk  ++   +++        + +++ +++    ++  +  +  +++k+kk++++++++k++k+ k+k++kkks++s+kk+ ++
  XP_026401922.1 142 HCWvHQRSFLPPTKASQTPILTTHintetgLPVIPTSLGMPIDGPIQDDEFGT--KSSKTKKQSSAKKSEKVAKVLKTKEPKKKSAASTKKKGNS 234
                     22202234455555555444444432111233334444444444444444333..4455555556667777888888888888766665444444 PP

       GAGA_bind 182 saderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeG 276
                        +++ +ekk++d+ ++g ++D s++P+PvCsCtG++rqCY+WG+GGWqS+CCtt++S yPLP+st+r+g+R+agrKmS+ga+ klL++L+ eG
  XP_026401922.1 235 I--STAIREKKNLDIIIDGSAMDFSQVPTPVCSCTGMPRQCYRWGAGGWQSSCCTTNLSEYPLPMSTTRPGSRLAGRKMSNGAYGKLLQRLTVEG 327
                     4..679999************************************************************************************** PP

       GAGA_bind 277 ydlsnpvDLkdhWAkHGtnkfvtir 301
                     ydls+++DLkdhWAkHGtnkfvti+
  XP_026401922.1 328 YDLSHAIDLKDHWAKHGTNKFVTIK 352
                     ************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MEEKVGLGIR NWDFSKQTVT DHAALKPVSG IPVSSSTTTE HQPHPHHYHQ HHQHQQHQHQ  60
HQHQHQHQLQ HQQQHQLQHQ HQHQHLQQHP LPHPQPLPHL HPQEQQHQHH QAAFLKMGMY  120
PNRHSMISES ETDLNAVDYA NHCWVHQRSF LPPTKASQTP ILTTHINTET GLPVIPTSLG  180
MPIDGPIQDD EFGTKSSKTK KQSSAKKSEK VAKVLKTKEP KKKSAASTKK KGNSISTAIR  240
EKKNLDIIID GSAMDFSQVP TPVCSCTGMP RQCYRWGAGG WQSSCCTTNL SEYPLPMSTT  300
RPGSRLAGRK MSNGAYGKLL QRLTVEGYDL SHAIDLKDHW AKHGTNKFVT IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.31e-61BBR-BPC family protein