PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401618.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 668aa MW: 73665.9 Da PI: 5.3435

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401618.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.8	1.6e-12	486	531	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_026401618.1 486 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAIAYINEL 531 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MNLWTDDNSS MMDAFMASDL SSPFAGANSW PPSSSASTIT SDQQQQQQQQ QQLPQPVVFN 60 QETLQQRLQI LIEGARESWT YAIFWQSSVD NTGVSFLGWG DGYYKGEEDK LKRKTTPSSL 120 AEQEHRKKVL RELNSLISGV PASADDPVDE EVTDTEWFFL VSMTQSFING GGLPGQAFFS 180 SYPVWLTGND RLLSSTCDRA KQAQLFGLQT MVCIPLANGV VELGSTEIIF QSSDLMNKVR 240 ILFNFNSPDN GSWPASSSQL QQQNDQGEND PSLLWISEPT PVLEIKESSS VPPVVAEVSK 300 PVIQFENHSS SSLTENPSSS IVHVQQQTQI QTQTQTFFTR ELNFSEYGFD GTSTKNSSHH 360 QPSSCKPESG EILSFGDSSK RNSSSAVNGN IFSNNSQFAQ DDKKKKKSVT SKGSNNDEAV 420 FSFTSGVVIP SSGVVKSNGA GGTVDSDHSD LEASVREAES SRVVDTEKRP RKRGRKPANG 480 REEPLNHVEA ERQRREKLNQ RFYALRAVVP NVSKMDKASL LGDAIAYINE LRTKLQNTES 540 DKEGLVSQVD SLKKELSCKD TRSSSVSAAP PDPDLKLLAH IGNKSPDVDI DVKILGWEAM 600 IRIQCNKKNH PAARLMAALK ELDLDVNYAS VSVVKDLMIQ QATVKMSSRL YTQEQLKSAL 660 ASRVADHR

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MNLWTDDNSS MMDAFMASDL SSPFAGANSW PPSSSASTIT SDQQQQQQQQ QQLPQPVVFN  60
QETLQQRLQI LIEGARESWT YAIFWQSSVD NTGVSFLGWG DGYYKGEEDK LKRKTTPSSL  120
AEQEHRKKVL RELNSLISGV PASADDPVDE EVTDTEWFFL VSMTQSFING GGLPGQAFFS  180
SYPVWLTGND RLLSSTCDRA KQAQLFGLQT MVCIPLANGV VELGSTEIIF QSSDLMNKVR  240
ILFNFNSPDN GSWPASSSQL QQQNDQGEND PSLLWISEPT PVLEIKESSS VPPVVAEVSK  300
PVIQFENHSS SSLTENPSSS IVHVQQQTQI QTQTQTFFTR ELNFSEYGFD GTSTKNSSHH  360
QPSSCKPESG EILSFGDSSK RNSSSAVNGN IFSNNSQFAQ DDKKKKKSVT SKGSNNDEAV  420
FSFTSGVVIP SSGVVKSNGA GGTVDSDHSD LEASVREAES SRVVDTEKRP RKRGRKPANG  480
REEPLNHVEA ERQRREKLNQ RFYALRAVVP NVSKMDKASL LGDAIAYINE LRTKLQNTES  540
DKEGLVSQVD SLKKELSCKD TRSSSVSAAP PDPDLKLLAH IGNKSPDVDI DVKILGWEAM  600
IRIQCNKKNH PAARLMAALK ELDLDVNYAS VSVVKDLMIQ QATVKMSSRL YTQEQLKSAL  660
ASRVADHR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	468	476	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein