PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401091.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ZF-HD

Protein Properties

Length: 381aa MW: 42744.5 Da PI: 9.4248

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401091.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	98.8	4.1e-31	85	141	3	58
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 +v+YkeC+kNhAas+Ggha DGCgEfm++ +++ ++a++l+CaACgCHRnFHR+e + XP_026401091.1 85 QVKYKECMKNHAASIGGHANDGCGEFMQEADQDnNNARSLRCAACGCHRNFHRKEIH 141 799************************9999899****************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MNLSMVPYSK QVMMVGGGDQ DNSNKKGSSS NEVIDIKPVV EEINCNDSRR FGIINLAEPL 60 LEPIVVKPVT SNSSNMKQHH SSKFQVKYKE CMKNHAASIG GHANDGCGEF MQEADQDNNN 120 ARSLRCAACG CHRNFHRKEI HGSGFVDHLQ QQAVVNYNGT NPRYEKTKKH HHHHQSRGGF 180 NPLPSLSLPQ VHNNNQQFLV QHRSSKNNSP INNNNIRDAL FGDDDDNTTT MDYNNEDRRS 240 ETPEERVGMM RNGGSSSNNG SSNKRFRTKF SQEQKDKMLD FADKIGWRIQ KQDDNALNQF 300 CLEIGVKRQV LKVWMHNNKN TLRKPQFPSS SAALPTSSSV PAAAPVVMQL QSPPSPPPTS 360 PAAQHHQHHH QQQHPRSING V

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MNLSMVPYSK QVMMVGGGDQ DNSNKKGSSS NEVIDIKPVV EEINCNDSRR FGIINLAEPL  60
LEPIVVKPVT SNSSNMKQHH SSKFQVKYKE CMKNHAASIG GHANDGCGEF MQEADQDNNN  120
ARSLRCAACG CHRNFHRKEI HGSGFVDHLQ QQAVVNYNGT NPRYEKTKKH HHHHQSRGGF  180
NPLPSLSLPQ VHNNNQQFLV QHRSSKNNSP INNNNIRDAL FGDDDDNTTT MDYNNEDRRS  240
ETPEERVGMM RNGGSSSNNG SSNKRFRTKF SQEQKDKMLD FADKIGWRIQ KQDDNALNQF  300
CLEIGVKRQV LKVWMHNNKN TLRKPQFPSS SAALPTSSSV PAAAPVVMQL QSPPSPPPTS  360
PAAQHHQHHH QQQHPRSING V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24660.1	1e-26	ZF-HD family protein