PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026400654.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 25671.2 Da PI: 8.8691 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.6 | 3.4e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELS+LCda+va+++fsstgkl+eyss XP_026400654.1 9 KKIDNATARQVTFSKRRRGLFKKAEELSILCDADVALLVFSSTGKLFEYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 56 | 1.7e-19 | 83 | 173 | 10 | 100 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ + + + + a+L+k i + +r +R++ Ge+L+ L+++eLqqLe+ Le +l+++ ++K e ++++i+ lq+k el een++Lr++++e XP_026400654.1 83 ASLELQLENSNCARLQKDIAEQRRRLRQMRGEELHGLNIEELQQLEKTLEAGLSRVLETKGERIMKEISSLQRKGMELLEENERLRQQMAE 173 555667778899****************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSILCD ADVALLVFSS TGKLFEYSSS 60 SMKGIIERRD LHSKNLQKPN QPASLELQLE NSNCARLQKD IAEQRRRLRQ MRGEELHGLN 120 IEELQQLEKT LEAGLSRVLE TKGERIMKEI SSLQRKGMEL LEENERLRQQ MAEISRGNQR 180 STVLINSDKE GGQSSESVTN ICSSISGPPL EDDSSDTSLK LGLPFPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-94 | MIKC_MADS family protein |