PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026399778.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 232aa    MW: 25725 Da    PI: 5.7526
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026399778.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.24.6e-06179218954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     E++ R+++++ + +Lr ++P a       ++ a++L +Av+Y+ksL
  XP_026399778.1 179 EKK-RHKMKEVIKTLRGIVPGA-----DEMDNAAVLDEAVKYLKSL 218
                     555.699**************9.....79***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MQSDQRFYNT YAVPPHPYQG VGGVYLNATS NTPIPLPGGM QIRPFNGVEL QPFEVCPKNF  60
IIFDQTERRS RIIVNPVVAE KFKYSGFDVQ GNDEMKDVGA GYSESSIPMK EDTADINALL  120
SLDYEVGEEE DEEEISTART LGSSRGSSPD SCSTYGSRPS KVRLTSSTQK SFTCSSSIEK  180
KRHKMKEVIK TLRGIVPGAD EMDNAAVLDE AVKYLKSLKV EVKKHGIVKF HD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.13e-23bHLH family protein