PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026399472.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 334aa    MW: 38768.4 Da    PI: 4.7761
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026399472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.21.4e-161562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W +eEde+l+  v+ +G ++W++Ia+  g++R++k+c++rw +yl
   XP_026399472.1 15 KGPWVEEEDERLAMFVTVMGERRWDSIAKASGLKRSGKSCRLRWMNYL 62
                     79********************************************97 PP
2Myb_DNA-binding48.52e-1569113248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g +T eE+  ++++++++G++ W++Iar+++ gRt++++k++w+++l
   XP_026399472.1  69 GQMTIEEEHMILQLHERWGNK-WSRIARRLP-GRTDNEIKNYWRTHL 113
                      67899****************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MVYRNASMQD DTIRKGPWVE EEDERLAMFV TVMGERRWDS IAKASGLKRS GKSCRLRWMN  60
YLRPDLKHGQ MTIEEEHMIL QLHERWGNKW SRIARRLPGR TDNEIKNYWR THLRKRAQEQ  120
EQEKVQREIE IAMSSKPEKT MLRQDSDLSS QSTTSYESSN GSGGDNKMIM SEDVFVSSDY  180
PFTMSPYETR LSDWISGSSS NNQTDTFKDQ NVSSVEDSWF RYPAAGETDV DSIFDATPQV  240
VIEYDNKKLE IIPFDLKIKN VVFELNPEGA PDLDGFSGDF YKAAWKLIHD DLIAAIRCPY  300
PTVLMMDLFY VDKLPTYHYG DDLLIWSGSQ DENA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53200.17e-58MYB family protein