PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026398077.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 616aa    MW: 68278.7 Da    PI: 4.9382
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026398077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS368.11.2e-1122436162374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilkfs 94 
                      + LlecA  +s+++ e a +lL+r++e +s+ gdp++R+a+yf e L +rl +  ++++k+ p ++ ++ +  s+e++ ++k++++++P+ kfs
  XP_026398077.1 243 LKSLLECAL-ISESEPEHAIKLLNRVRESVSELGDPTERVAFYFSEVLYNRLIS--PKISKTNPLTDFDQAScsSEEVTLSYKTLNDACPYSKFS 334
                     5789***97.88999***************************************..999999988888777677999999*************** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                     hltaNqaIlea+e+++++Hi+Df+i qGlQW+aLlqaLa+R++g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + + +
  XP_026398077.1 335 HLTANQAILEATESASCIHIVDFGIVQGLQWAALLQALATRSSGKPtMIRISGIPAPTLGrsPAASLLATGNRLRDFAKLLDLNFEFEP-ILTPI 428
                     ******************************************777769*********99999999************************.799** PP

            GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                     ++l+ +++rv+++E+laVn++lql++lld++ +  +   + Lkl ksl+Pkvv++ e ea++n+ s+++rf +al+yy a+f+sle +l+r+s+e
  XP_026398077.1 429 HELNKSSFRVQKNEVLAVNFMLQLYNLLDSTNCAVE---RALKLAKSLNPKVVTLGEYEASLNHVSYVDRFKNALKYYLAVFESLEPSLARDSSE 520
                     ****************************99998888...9******************************************************* PP

            GRAS 282 rikvErellgreivnvvace.gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaW 373
                     ri v+r llgr+i  vv  e g  rrer+e++++W+  +e++GF + pls++ ++qa+ ll +++ s  y+++e+   l+ l W d pL++vS+W
  XP_026398077.1 521 RIRVDRLLLGRRIAGVVGPEeGPVRRERMEEYAQWKVLMEACGFDSFPLSHYSVSQARILLWNYNySSKYSIKESAPGLLsLAWDDIPLLTVSSW 615
                     *****************9761566*****************************************9999******999999************** PP

            GRAS 374 r 374
                     r
  XP_026398077.1 616 R 616
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 616 aa     Download sequence    
MAYMCTDSGN LMAIAQQVIQ QKQQQQQQQQ QLQQQQQQEI HQQQQQFLGV NPFSWCVQTQ  60
NPSPPSSFGF GLTGSEPYTV GVGGGGCVSD AGGDESDPLS SFPHLDHHSI GFRLADEFES  120
DDWMETLING GGGGHGNEDS PESSELAFYN NNDPFVTCSS RLSTQSSNPS SDLCPPLIFP  180
SDTQQKNPNL LQSHHNHQLP TWVPTPVLQP QDLPSLQNSS SLLQKPQVLS QSSSEAESIS  240
PLLKSLLECA LISESEPEHA IKLLNRVRES VSELGDPTER VAFYFSEVLY NRLISPKISK  300
TNPLTDFDQA SCSSEEVTLS YKTLNDACPY SKFSHLTANQ AILEATESAS CIHIVDFGIV  360
QGLQWAALLQ ALATRSSGKP TMIRISGIPA PTLGRSPAAS LLATGNRLRD FAKLLDLNFE  420
FEPILTPIHE LNKSSFRVQK NEVLAVNFML QLYNLLDSTN CAVERALKLA KSLNPKVVTL  480
GEYEASLNHV SYVDRFKNAL KYYLAVFESL EPSLARDSSE RIRVDRLLLG RRIAGVVGPE  540
EGPVRRERME EYAQWKVLME ACGFDSFPLS HYSVSQARIL LWNYNYSSKY SIKESAPGLL  600
SLAWDDIPLL TVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-173GRAS family protein