PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397940.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 368aa MW: 41904 Da PI: 6.5874

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397940.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.7	1.5e-11	168	215	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k +sKa +L + ++Y++sLq XP_026397940.1 168 SHSLAERVRREKISERLKMLQSLVPGC----DKVNSKAHMLDEIINYVQSLQ 215 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MAAFTFQPHF HLDSLFMSNN NNYIINPIYF PSMQDSSLQI FDNNVQQKIE PSMSDKTTTD 60 NTPTSSIVVD LEGGGDDQVI NSQEKTNPSM EKKKRKNGSC LDSDINQSKD RKQRSKPKRQ 120 KKCELEVKEE KKIKEDKNKK KRDEAKAAIK DGADYVHVRA RRGQASDSHS LAERVRREKI 180 SERLKMLQSL VPGCDKVNSK AHMLDEIINY VQSLQVQVEM LSMKLAYMNP ILYDFGMDLA 240 DGFFCHELQK PITSTLAAAT SSPLPLTTAP APTTTNSTTA PTEIANVVTP TFSSTSNDTT 300 LHENSVLFST IQQQEVQQQQ KLNDFSQVLL QQQQQQELPN NEDLLCYMDY YHQHHHRQEG 360 ATNLFFYE

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MAAFTFQPHF HLDSLFMSNN NNYIINPIYF PSMQDSSLQI FDNNVQQKIE PSMSDKTTTD  60
NTPTSSIVVD LEGGGDDQVI NSQEKTNPSM EKKKRKNGSC LDSDINQSKD RKQRSKPKRQ  120
KKCELEVKEE KKIKEDKNKK KRDEAKAAIK DGADYVHVRA RRGQASDSHS LAERVRREKI  180
SERLKMLQSL VPGCDKVNSK AHMLDEIINY VQSLQVQVEM LSMKLAYMNP ILYDFGMDLA  240
DGFFCHELQK PITSTLAAAT SSPLPLTTAP APTTTNSTTA PTEIANVVTP TFSSTSNDTT  300
LHENSVLFST IQQQEVQQQQ KLNDFSQVLL QQQQQQELPN NEDLLCYMDY YHQHHHRQEG  360
ATNLFFYE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	116	KKKRKNGSCLDSDINQSKDRKQRSK
2	92	118	KKKRKNGSCLDSDINQSKDRKQRSKPK
3	92	134	KKKRKNGSCLDSDINQSKDRKQRSKPKRQKKCELEVKEEKKIK
4	93	117	KKKRKNGSCLDSDINQSKDRKQRSK
5	93	135	KKKRKNGSCLDSDINQSKDRKQRSKPKRQKKCELEVKEEKKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	2e-44	bHLH family protein