PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397718.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 513aa MW: 57050.1 Da PI: 6.5536

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397718.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.1	1.2e-14	182	241	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_026397718.1 182 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEDKAARAYDLAALKYWG 241 57*****************666664477446******99***********98 PP
2	AP2	47.2	5.3e-15	284	335	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_026397718.1 284 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 335 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MDTSHQNWLG FSLSNAQYHE HTSSSPSVVP DHHQQQQQQF FQTLNATSFP RDENENDGST 60 NLSMYNFDRK LEDFLGVSST NNTHESADNN SNKNNNSTNS CTADQYGIMT YDSELKTIAS 120 CFLRGYTTDN NHYQNPSLDH HDLETTNSTG TTTAMVAAPL PVAVTSDAVS KKSVDNFGQR 180 TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEDKAAR AYDLAALKYW 240 GPTTSTNFPV TNYEKEIEDM TNMTRQEFVA SLRRKSSGFS RGASIYRGVT RHHQHGRWQA 300 RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDMSRYDVK SIANSNLPIG 360 GITGSSSKTT KAIINSDSIS DDRSNDGGHS DDRDFSSTTL SFGLPIKHDP SSTDYWSLVN 420 GSGQNNGVTN ILHQQTSPHD QRNIAGNMFF NGGFVHQLQQ QEQQCVMSSS SPMSYDGSAA 480 GYGGEWVLAQ PPLVYQTGKP NLSVFQTPIY GME

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MDTSHQNWLG FSLSNAQYHE HTSSSPSVVP DHHQQQQQQF FQTLNATSFP RDENENDGST  60
NLSMYNFDRK LEDFLGVSST NNTHESADNN SNKNNNSTNS CTADQYGIMT YDSELKTIAS  120
CFLRGYTTDN NHYQNPSLDH HDLETTNSTG TTTAMVAAPL PVAVTSDAVS KKSVDNFGQR  180
TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEDKAAR AYDLAALKYW  240
GPTTSTNFPV TNYEKEIEDM TNMTRQEFVA SLRRKSSGFS RGASIYRGVT RHHQHGRWQA  300
RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDMSRYDVK SIANSNLPIG  360
GITGSSSKTT KAIINSDSIS DDRSNDGGHS DDRDFSSTTL SFGLPIKHDP SSTDYWSLVN  420
GSGQNNGVTN ILHQQTSPHD QRNIAGNMFF NGGFVHQLQQ QEQQCVMSSS SPMSYDGSAA  480
GYGGEWVLAQ PPLVYQTGKP NLSVFQTPIY GME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-139	AP2 family protein